E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L022581
BDB022581
BDBM525681
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)c(F)c2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H30F5N5O3
591.581000
PEHSNIFVIAESBC-UHFFFAOYSA-N P61964, Q03164, Q15291 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM525681; PubChem:CID138558058
Local ready
Direct docking supported
E3L022582
BDB022582
BDBM525682
CN1CC2CN(c3ccc(-c4cc(CN5CCOCC5)ccc4F)cc3NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)CC2C1
C31H33F4N5O3
599.629000
KVGWISGIDMJMCJ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM525682
Local ready
Direct docking supported
E3L022583
BDB022583
US11174250, Example 101
CN(C)C1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C1
C31H35F4N5O3
601.645000
YKWQWMBSYUCMLT-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525683; PubChem:CID137376764
Local ready
Direct docking supported
E3L022584
BDB022584
US11174250, Example 102
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2cc(F)cc3[nH]cnc23)CC1
C30H32F2N6O2
546.622000
ZONWONWYQRHXFI-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525684; PubChem:CID137376400
Local ready
Direct docking supported
E3L022585
BDB022585
US11174250, Example 103
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2nc3ccccc3[nH]2)CC1
C30H33FN6O2
528.632000
IVRANXJUYMIUKO-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525685; PubChem:CID138558106
Local ready
Direct docking supported
E3L022586
BDB022586
BDBM525687
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2ccc(=O)[nH]c2)CC1
C28H32FN5O3
505.594000
UMGLYFUYPLXUEU-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525687; PubChem:CID137376651
Local ready
Direct docking supported
E3L022587
BDB022587
US11174250, Example 106
CC(=O)Nc1cc(C)c(C(=O)Nc2cc(-c3cc(CN4CCOCC4)ccc3F)ccc2N2CCN(C)CC2)cn1
C31H37FN6O3
560.674000
FSZYZDCGGYNVDQ-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525688; PubChem:CID137376745
Local ready
Direct docking supported
E3L022588
BDB022588
US11174250, Example 107
COc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4CCN(CC5CC5)CC4)ccc3F)ccc2N2CCN(C)CC2)cn1
C34H40F4N6O2
640.726000
HHZIAOCNJDXBOK-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525689; PubChem:CID137376466
Local ready
Direct docking supported
E3L022589
BDB022589
US11174250, Example 108
CNc1cc(C(F)(F)F)c(C(=O)Nc2cc(-c3cc(CN4CCOCC4)ccc3F)ccc2N2CCN(C)CC2)cn1
C30H34F4N6O2
586.634000
AKPOZBSWTYUTFS-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525690; PubChem:CID137377548
Local ready
Direct docking supported
E3L022590
BDB022590
US11174250, Example 109
CN1CCN(c2ccc(-c3cc(CN4CCOCC4)ccc3F)cc2NC(=O)c2cnc(N)cc2C(F)(F)F)CC1
C29H32F4N6O2
572.607000
NHGMXRRRHPDJNK-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525691; PubChem:CID137376399
Local ready
Direct docking supported
E3L022591
BDB022591
BDBM525692
CN1CCN(c2ccc(-c3cc(C(=O)N(C)C4CCCCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C32H35F4N5O3
613.656000
LSSYDYCCKSSRBW-UHFFFAOYSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525692; PubChem:CID137376437
Local ready
Direct docking supported
E3L022592
BDB022592
BDBM525693
C[C@@H]1CN(c2ccc(-c3cc(C(=O)N(C)C4CCCCC4)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C34H39F4N5O3
641.710000
OYQKINJAVGKCOA-OYRHEFFESA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525693; PubChem:CID137376370
Local ready
Direct docking supported
E3L022593
BDB022593
BDBM525694
C[C@@H]1CN(c2ccc(-c3ccc(F)c(CN(C)C4COC4)c3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H34F5N5O3
619.635000
FTBJXCRROBRPAE-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM525694
Local ready
Direct docking supported
E3L022594
BDB022594
BDBM525695
C[C@@H]1CN(c2ccc(-c3cc(CN(C)C4COC4)c(F)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H34F5N5O3
619.635000
VVBMHXNZBCWKFJ-HDICACEKSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB
BindingDB:BDBM525695
Local ready
Direct docking supported
E3L022595
BDB022595
BDBM525696
C[C@@H]1CN(c2ccc(-c3c(F)ccc(CNC4CCCCC4)c3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C33H38F5N5O2
631.690000
VSFCYUIJDUEDOP-BGYRXZFFSA-N P61964, Q03164, Q15291 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525696; PubChem:CID137376513
Local ready
Direct docking supported
E3L022596
BDB022596
BDBM525697
C[C@@H]1CN(c2ccc(-c3c(F)cc(CNC4CCCCC4)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C33H38F5N5O2
631.690000
ZVPQRCAFKKWFMR-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525697; PubChem:CID137376346
Local ready
Direct docking supported
E3L022597
BDB022597
US11174250, Example 117
C[C@@H]1CN(c2ccc(-c3ccc(C(N)=O)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H27F4N5O3
545.537000
BZXCPENKFALFHT-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525699; PubChem:CID138558083
Local ready
Direct docking supported
E3L022598
BDB022598
US11174250, Example 118
C[C@@H]1CN(c2ccc(-c3ccc(N4CCOCC4)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H33F4N5O3
587.618000
GTOLGZZOPRZMBN-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525700; PubChem:CID138558068
Local ready
Direct docking supported
E3L022599
BDB022599
BDBM525701
C[C@@H]1CN(c2ccc(-c3cc(C(N)=O)ccc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H27F4N5O3
545.537000
JQOGQOSHAYKGBW-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525701; PubChem:CID137376439
Local ready
Direct docking supported
E3L022600
BDB022600
US11174250, Example 120
C[C@@H]1CN(c2ccc(-c3cc(C(=O)NC(C)(C)CC(C)(C)C)c(F)cc3F)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C35H42F5N5O3
675.743000
GHJDRILZTRXSSQ-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM525702; PubChem:CID137376362
Local ready
Direct docking supported