E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023561
BDB023561
US11236047, Example 219
COc1ccc(CN2C(=O)c3cc(C(C)(O)c4cnn(C)c4)cc(F)c3[C@]2(OCC2(CO)CC2)c2ccc(Cl)cc2)cn1
C32H32ClFN4O5
607.082000
SRKAMEZCGUXPSS-BDJZEIKTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535422; PubChem:CID137497980
Local ready
Direct docking supported
E3L023562
BDB023562
US11236047, Example 221
C[C@@H](O)CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)c3cnn(C)c3)cc2C(=O)N1Cc1ccc(Cl)cn1
C29H27Cl2FN4O4
585.463000
MNQQXUGKGLDIBL-YQNXAQHZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535425; PubChem:CID135282239
Local ready
Direct docking supported
E3L023563
BDB023563
US11236047, Example 223
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(O[C@H]2CCOC2)c2ccc(Cl)cc2)cn1
C30H27Cl2FN4O4
597.474000
YSIGKCLZFXUHTB-DHSZNAABSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535426; PubChem:CID135282418
Local ready
Direct docking supported
E3L023564
BDB023564
US11236047, Example 224
COc1ccc(CN2C(=O)c3cc(C(C)(O)c4cnn(C)c4)cc(F)c3[C@]2(OCC2(CO)CC2)c2ccc(Cl)cc2)nc1
C32H32ClFN4O5
607.082000
FCXTWHDUAWMEGT-BDJZEIKTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535427; PubChem:CID137498003
Local ready
Direct docking supported
E3L023565
BDB023565
US11236047, Example 227
Cc1ccc(CN2C(=O)c3cc(C(C)(O)c4cnn(C)c4)cc(F)c3[C@]2(OCC2(O)CC2)c2ccc(Cl)cc2)nc1
C31H30ClFN4O4
577.056000
DKOKUKMQYMDUPS-ZGVDRVBQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535430; PubChem:CID135282402
Local ready
Direct docking supported
E3L023566
BDB023566
US11236047, Example 174
C=C[C@@H](c1ccc(Cl)cn1)N1C(=O)c2cc(C(C)(C)O)cc(F)c2[C@]1(OCC1(O)CC1)c1ccc(Cl)cc1
C29H27Cl2FN2O4
557.449000
SJKVIISRJBQDPQ-PWUYWRBVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535431; PubChem:CID135282301
Local ready
Direct docking supported
E3L023567
BDB023567
US11236047, Example 183
CCn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCC2(O)CC2)c2ccc(Cl)cc2)cn1
C31H29Cl2FN4O4
611.501000
QYPLRLGVDBPTMJ-ZGVDRVBQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535432; PubChem:CID135282376
Local ready
Direct docking supported
E3L023568
BDB023568
US11236047, Example 373
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)c3cnn(C)c3)cc2C(=O)N1Cc1ncc(Cl)cc1S(C)(=O)=O
C28H25Cl2FN4O5S
619.502000
IXMPETAWBZRMPY-PLYLYKGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535434; PubChem:CID135282963
Local ready
Direct docking supported
E3L023569
BDB023569
US11236047, Example 297
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)C3CCN(C(C)=O)CC3)cc2C(=O)N1Cc1ccc(C#N)cn1
C31H30ClFN4O4
577.056000
UTHIKBCDDXKGAA-NLIBRCFJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535435; PubChem:CID135282693
Local ready
Direct docking supported
E3L023570
BDB023570
US11236047, Example 230
COc1ccc(CN2C(=O)c3cc(C(C)(O)c4cnn(C)c4)cc(F)c3[C@]2(OCC2(O)CC2)c2ccc(Cl)cc2)cn1
C31H30ClFN4O5
593.055000
YHCHSJVYIURCJK-ZGVDRVBQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535436; PubChem:CID137497974
Local ready
Direct docking supported
E3L023571
BDB023571
US11236047, Example 231
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(F)cn2)[C@@]3(OCC2(O)CC2)c2ccc(Cl)cc2)cn1
C30H27ClF2N4O4
581.019000
CUPHKJSAHLYMSR-FUJFQHJFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535438; PubChem:CID137498010
Local ready
Direct docking supported
E3L023572
BDB023572
US11236047, Example 186
Cc1nnc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCC2(O)CC2)c2ccc(Cl)cc2)o1
C29H25Cl2FN4O5
599.446000
YLSBIZWHGKMZFC-ZBAATNBSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535439; PubChem:CID135282684
Local ready
Direct docking supported
E3L023573
BDB023573
US11236047, Example 313
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(OCCO)c1ccc(Cl)cc1)C1CCS(=O)(=O)CC1
C29H29Cl2FN2O6S
623.530000
LNHWDLFOWCRHJS-YPJJGMIRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535440; PubChem:CID137497990
Local ready
Direct docking supported
E3L023574
BDB023574
US11236047, Example 155
CNC(=O)CNCC1(CO[C@]2(c3ccc(Cl)cc3)c3c(F)cc(C(C)(C)O)cc3C(=O)N2Cc2ccc(Cl)cn2)CC1
C31H33Cl2FN4O4
615.533000
QYDCIWZUSXZNGK-WJOKGBTCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535441; PubChem:CID135282779
Local ready
Direct docking supported
E3L023575
BDB023575
US11236047, Example 385
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OCC1(O)CC1)c1ccc(Cl)cc1)C1(F)CCOCC1
C30H29Cl2F2N3O5
620.480000
NKWFYVHKVVJQBQ-DINWUYGQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535443; PubChem:CID137497986
Local ready
Direct docking supported
E3L023576
BDB023576
US11236047, Example 421
CC(=O)N1CCC(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCCO)c2ccc(Cl)cc2)CC1
C31H32Cl2FN3O5
616.517000
CXOYTFMILJYYKW-NLIBRCFJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535445; PubChem:CID135282639
Local ready
Direct docking supported
E3L023577
BDB023577
US11236047, Example 357
Cn1cc(C(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(C#N)cn2)[C@@]3(O[C@H]2CCOC2)c2ccc(Cl)cc2)cn1
C30H25ClFN5O4
574.012000
RRUBGLIKOBFXDA-FDTSKNAKSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535446; PubChem:CID135283067
Local ready
Direct docking supported
E3L023578
BDB023578
US11236047, Example 390
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)C3CN(C(C)=O)C3)cc2C(=O)N1Cc1ccc(Cl)cn1
C28H26Cl2FN3O4
558.437000
NGYNMONWMIFMBU-PLYLYKGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535448; PubChem:CID135282612
Local ready
Direct docking supported
E3L023579
BDB023579
US11236047, Example 391
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)C3CN(C(=O)CO)C3)cc2C(=O)N1Cc1ccc(Cl)cn1
C28H26Cl2FN3O5
574.436000
GIKVEWGVNKXMRA-PLYLYKGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535449; PubChem:CID135282679
Local ready
Direct docking supported
E3L023580
BDB023580
US11236047, Example 405
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C#N)cn1)[C@@]2(OCCO)c1ccc(Cl)cc1)C1CCC1
C29H27ClFN3O4
536.003000
ZDFDJHLMOSFIGS-YPJJGMIRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535450; PubChem:CID135282605
Local ready
Direct docking supported