E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025661
BDB025661
BDBM552995
CC1CN(c2cc(F)c(-c3cccc(CN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C30H33F4N5O3
587.618000
IAEZONCHIHJVKX-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM552995; PubChem:CID138541626
Local ready
Direct docking supported
E3L025662
BDB025662
BDBM552996
CN1CCN(c2cc(F)c(-c3ccnc(N4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C27H28F4N6O3
560.552000
IIHUZGGGNFKXJX-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552996; PubChem:CID137376923
Local ready
Direct docking supported
E3L025663
BDB025663
BDBM552997
CN1CCN(c2cc(F)c(-c3cncc(CN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C28H30F4N6O3
574.579000
JLYOQMKXQGIXGN-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552997; PubChem:CID138541639
Local ready
Direct docking supported
E3L025664
BDB025664
BDBM552998
CN1CCN(c2cc(F)c(-c3cncc(CNC4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H32F4N6O3
588.606000
CFABCGCXJQFLAB-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552998; PubChem:CID138542168
Local ready
Direct docking supported
E3L025665
BDB025665
BDBM552999
CN1CCN(c2cc(F)c(-c3cncc(CNC4CCOC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C28H30F4N6O3
574.579000
MLWGWBABICPOMW-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM552999; PubChem:CID138541634
Local ready
Direct docking supported
E3L025666
BDB025666
BDBM553000
C[C@@H]1CN(c2cc(F)c(-c3cccc(CN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C30H33F4N5O3
587.618000
IAEZONCHIHJVKX-LJQANCHMSA-N P61964, Q03164, Q15291, Q969U6 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM553000; PubChem:CID138541739
Local ready
Direct docking supported
E3L025667
BDB025667
BDBM553001
C[C@H]1CN(c2cc(F)c(-c3cccc(CN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C30H33F4N5O3
587.618000
IAEZONCHIHJVKX-IBGZPJMESA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553001; PubChem:CID138541625
Local ready
Direct docking supported
E3L025668
BDB025668
BDBM553002
C[C@@H]1CN(c2cc(F)c(-c3cccc(CN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H35F4N5O3
601.645000
SSOACIZIDUEFOJ-BGYRXZFFSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553002; PubChem:CID137377287
Local ready
Direct docking supported
E3L025669
BDB025669
BDBM553003
CN(C)C1CCN(c2cc(F)c(-c3cccc(CN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C1
C30H33F4N5O3
587.618000
ZUVJNJIAGSBLES-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553003; PubChem:CID138541676
Local ready
Direct docking supported
E3L025670
BDB025670
BDBM553004
CN1CCN(c2cc(Cl)c(-c3cccc(CN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C29H31ClF3N5O3
590.046000
LQOMVNOXBXIXGZ-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553004; PubChem:CID138542111
Local ready
Direct docking supported
E3L025671
BDB025671
BDBM553005
COc1cc(N2C[C@@H](C)N(C)[C@@H](C)C2)c(NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)cc1-c1cnc(N2CCOCC2)nc1
C29H34F3N7O4
601.630000
VPAPDESFNQJEAM-HDICACEKSA-N P61964, Q03164 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM553005; PubChem:CID138542109
Local ready
Direct docking supported
E3L025672
BDB025672
BDBM553006
CN1CCN(c2ccc(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC1
C26H28F3N7O3
543.550000
QNXFOPYFFZOHCX-UHFFFAOYSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553006; PubChem:CID138542385
Local ready
Direct docking supported
E3L025673
BDB025673
BDBM553008
C[C@@H]1CN(c2ccc(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H32F3N7O3
571.604000
HLVBKFBJGZIHHT-HDICACEKSA-N P61964, Q03164, Q15291, Q969U6 Histone-lysine N-methyltransferase 2A, WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553008; PubChem:CID138542237
Local ready
Direct docking supported
E3L025674
BDB025674
BDBM553009
C[C@@H]1CN(c2cc(C(F)(F)F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H31F6N7O3
639.601000
BSHVBRMHYSRWAH-CALCHBBNSA-N P61964, Q03164 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM553009; PubChem:CID138541844
Local ready
Direct docking supported
E3L025675
BDB025675
BDBM553011
Cc1cc(N2C[C@@H](C)N(C)[C@@H](C)C2)c(NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)cc1-c1cnc(N2CCOCC2)nc1
C29H34F3N7O3
585.631000
BACRUGIGWRRCPL-KDURUIRLSA-N P61964, Q03164 WD repeat-containing protein 5, Histone-lysine N-methyltransferase 2A
BindingDB, PubChem
BindingDB:BDBM553011; PubChem:CID138542457
Local ready
Direct docking supported
E3L025676
BDB025676
BDBM553012
C[C@@H]1CN(c2cc(F)c(-c3ccc4c(c3)OCO4)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H26F4N4O4
546.521000
XSKIDCKYOWFPGZ-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553012; PubChem:CID137377274
Local ready
Direct docking supported
E3L025677
BDB025677
BDBM553013
CC(=O)Nc1ccc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cn1
C27H28F4N6O3
560.552000
UZRUTOSAHIFTIN-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553013; PubChem:CID137377509
Local ready
Direct docking supported
E3L025678
BDB025678
BDBM553014
COc1cc(=O)[nH]cc1C(=O)Nc1cc(-c2cnc(N3CCOCC3)nc2)c(F)cc1N1C[C@@H](C)N(C)[C@@H](C)C1
C28H34FN7O4
551.623000
BEJAVWVXDWQOOD-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553014; PubChem:CID138542116
Local ready
Direct docking supported
E3L025679
BDB025679
US11319287, Example 70
CCOC(=O)c1c(-c2cccc3c2CCN3C(=O)[C@@H]2CCCN2C#N)cnn1Cc1ccc(OC)cc1
C28H29N5O4
499.571000
DEONVMQTIFZVEA-VWLOTQADSA-N P09936 Ubiquitin carboxyl-terminal hydrolase isozyme L1
BindingDB, PubChem
BindingDB:BDBM553015; PubChem:CID124197557
Local ready
Direct docking supported
E3L025680
BDB025680
BDBM553016
C[C@@H]1CN(c2cc(F)c(-c3ccnc(OCC4CC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H31F4N5O3
573.591000
TVNJHGAUZGOANB-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553016; PubChem:CID137376993
Local ready
Direct docking supported