E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025801
BDB025801
US11319299, Example 187
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cncnc2C(F)(F)F)C[C@H](C)N1C
C27H30F4N8O2
574.583000
RUPUHLIZROVTGP-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553138; PubChem:CID137376844
Local ready
Direct docking supported
E3L025802
BDB025802
US11319299, Example 188
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2scnc2C(F)(F)F)C[C@H](C)N1C
C26H29F4N7O2S
579.624000
DLWWWOYTMSAGFU-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553139; PubChem:CID138541660
Local ready
Direct docking supported
E3L025803
BDB025803
US11319299, Example 189
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(C(F)(F)F)ccc2F)C[C@H](C)N1C
C29H31F5N6O2
590.597000
MPHUDQGSNSEQPS-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553140; PubChem:CID137377146
Local ready
Direct docking supported
E3L025804
BDB025804
US11319299, Example 190
COc1cc(F)cc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)c1
C29H34F2N6O3
552.626000
PKDFFVKJSBENPK-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553141; PubChem:CID137377003
Local ready
Direct docking supported
E3L025805
BDB025805
US11319299, Example 191
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)cc3)cc2NC(=O)c2cc(Cl)cc(Cl)c2)C[C@H](C)N1C
C30H33Cl2FN4O2
571.524000
DDEZEMUMMOZZLK-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553142; PubChem:CID137376703
Local ready
Direct docking supported
E3L025806
BDB025806
US11319299, Example 192
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccn(C)n2)CCN1C
C25H31FN8O2
494.575000
IUCXFCQIQFULIN-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553143; PubChem:CID138551491
Local ready
Direct docking supported
E3L025807
BDB025807
US11319299, Example 193
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc[nH]n2)CCN1C
C24H29FN8O2
480.548000
HSERILGIBDJTFV-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553144; PubChem:CID138551329
Local ready
Direct docking supported
E3L025808
BDB025808
US11319299, Example 194
Cc1nc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2CCN(C)[C@@H](C)C2)cs1
C25H30FN7O2S
511.627000
YXOSTINZUJCQDD-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553145; PubChem:CID138551545
Local ready
Direct docking supported
E3L025809
BDB025809
US11319299, Example 195
Cc1ncc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2CCN(C)[C@@H](C)C2)s1
C25H30FN7O2S
511.627000
MSXCRBSSIOOQJA-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553146; PubChem:CID138551326
Local ready
Direct docking supported
E3L025810
BDB025810
BDBM553147
CC(=O)Nc1ccc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3CCN(C)[C@@H](C)C3)cc2F)cn1
C26H26F4N6O3
546.525000
NDKIFOKHSANPHA-AWEZNQCLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553147; PubChem:CID138551330
Local ready
Direct docking supported
E3L025811
BDB025811
BDBM553148
C[C@H]1CN(c2cc(F)c(-c3cnc(C#N)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C24H21F4N7O2
515.471000
LAYWLNIDVCVRKA-ZDUSSCGKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553148; PubChem:CID138551489
Local ready
Direct docking supported
E3L025812
BDB025812
BDBM553149
C[C@H]1CN(c2cc(F)c(-c3ccc(OCC4CC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C28H29F4N5O3
559.564000
SLBRGGBWEMXENK-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553149; PubChem:CID138551390
Local ready
Direct docking supported
E3L025813
BDB025813
US11319299, Example 199
Cc1nc(C(F)(F)F)c(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2CCN(C)[C@@H](C)C2)s1
C26H29F4N7O2S
579.624000
JIQDKYPMGHRZCX-HNNXBMFYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553150; PubChem:CID138551434
Local ready
Direct docking supported
E3L025814
BDB025814
US11319299, Example 200
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(Cl)cc(Cl)c2)CCN1C
C27H29Cl2FN6O2
559.473000
JMGCJYGZCRFPOY-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553151; PubChem:CID138551484
Local ready
Direct docking supported
E3L025815
BDB025815
BDBM553152
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CCN1C
C29H30F5N5O3
591.581000
XEHWBWZGLUGIJJ-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553152; PubChem:CID138551374
Local ready
Direct docking supported
E3L025816
BDB025816
BDBM553153
C[C@@H]1CN(c2ncc(-c3cc(NC(=O)c4c[nH]c(=O)cc4C(F)(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)C[C@H](C)O1
C29H33F4N7O3
603.621000
UFKGPESBDLSXLB-OKZBNKHCSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553153
Local ready
Direct docking supported
E3L025817
BDB025817
US11319299, Example 203
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCCN(C)CC4)nc3)cc2NC(=O)c2ccc(F)cc2C(F)(F)F)C[C@H](C)N1C
C31H36F5N7O
617.667000
ASUJCSXQIRXZER-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553154; PubChem:CID138541646
Local ready
Direct docking supported
E3L025818
BDB025818
US11319299, Example 204
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)cc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H35F4N5O3
601.645000
RGGQHPLPVBDOKN-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553155; PubChem:CID138541697
Local ready
Direct docking supported
E3L025819
BDB025819
BDBM553156
C[C@@H]1CN(c2cc(F)c(-c3cncc(C#N)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H24F4N6O2
528.510000
ISCHLFVJHYMKAJ-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553156; PubChem:CID137377019
Local ready
Direct docking supported
E3L025820
BDB025820
BDBM553157
C[C@@H]1CN(c2cc(F)c(-c3cncc(Cl)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C25H24ClF4N5O2
537.945000
NEFDCXFRTHUMTF-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553157; PubChem:CID137376766
Local ready
Direct docking supported