E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L026061
BDB026061
US11319299, Example 475
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOC[C@@H]4C)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)C[C@H](C)N1C
C30H36F3N7O3
599.658000
ARRGSKGNSFDJAS-OTWHNJEPSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553400; PubChem:CID138551482
Local ready
Direct docking supported
E3L026062
BDB026062
BDBM553401
CCCN1CC[C@H]2CN(c3cc(F)c(-c4cnc(N5CCOCC5)nc4)cc3NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)C[C@H]21
C30H33F4N7O3
615.632000
JZLWCFLWIODPLY-HFJWLAOPSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553401
Local ready
Direct docking supported
E3L026063
BDB026063
BDBM553402
CN1CC[C@H]2CN(c3cc(F)c(-c4cnc(N5CCOCC5)nc4)cc3NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)C[C@H]21
C28H29F4N7O3
587.578000
SAOIRDKEKRZOPF-UPCLLVRISA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553402
Local ready
Direct docking supported
E3L026064
BDB026064
US11319299, Example 478
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)c(F)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)F)CCN1C
C30H33F4N5O3
587.618000
DIBDVTPTCCSFFI-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553403; PubChem:CID138542047
Local ready
Direct docking supported
E3L026065
BDB026065
BDBM553404
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)CC[N+]1(C)C
C28H32F4N7O3+
590.602000
CVGXECZFDLTKFN-KRWDZBQOSA-O P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553404; PubChem:CID138551783
Local ready
Direct docking supported
E3L026066
BDB026066
US11319299, Example 480
C[C@H]1CN(c2ncc(-c3cc(NC(=O)c4cn(C)c(=O)cc4C(F)F)c(N4CCN(C)[C@@H](C)C4)cc3F)cn2)CCO1
C29H34F3N7O3
585.631000
YVMPDRKPFAFZNO-ROUUACIJSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553405; PubChem:CID138551497
Local ready
Direct docking supported
E3L026067
BDB026067
BDBM553407
C[C@@H]1CN(c2cc(F)c(-c3nc(C(=O)NCC4CC4)cs3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H30F4N6O3S
606.646000
BJNBDBFEBNKQSS-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553407
Local ready
Direct docking supported
E3L026068
BDB026068
BDBM553408
C[C@@H]1CN(c2cc(F)c(-c3nc(C(=O)N(C)CC4CC4)cs3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H32F4N6O3S
620.673000
ISVIXJCWWNNMMA-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553408
Local ready
Direct docking supported
E3L026069
BDB026069
BDBM553409
C[C@@H]1CN(c2cc(F)c(-c3nc(C(=O)NC4CCCCC4)cs3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F4N6O3S
634.700000
VSNABWAHNRSAAG-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553409; PubChem:CID138541756
Local ready
Direct docking supported
E3L026070
BDB026070
BDBM553410
C[C@@H]1CN(c2cc(F)c(-c3nc(C(=O)N(C)C4CCCCC4)cs3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H36F4N6O3S
648.727000
RWKIWJCONPREIM-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553410
Local ready
Direct docking supported
E3L026071
BDB026071
BDBM553411
C[C@@H]1CN(c2cc(F)c(-c3nc(C(=O)N4CCOCC4)cs3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C28H30F4N6O4S
622.645000
PJHQOQMTQOFQRX-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553411; PubChem:CID137377303
Local ready
Direct docking supported
E3L026072
BDB026072
BDBM553412
C[C@@H]1CN(c2cc(F)c(-c3nc(C(=O)N4CCN(C)CC4)cs3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N7O3S
635.688000
MOJFTKOOBHMCQL-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553412
Local ready
Direct docking supported
E3L026073
BDB026073
BDBM553413
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)OC4(C)COC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H35F4N5O5
621.632000
FGQNEDICFVEMAT-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553413
Local ready
Direct docking supported
E3L026074
BDB026074
BDBM553414
C[C@@H]1CN(c2cc(F)c(C3=CCCN(C(=O)OC4(C)COC4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H35F4N5O5
621.632000
YYJPLDTYLNMLIB-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553414
Local ready
Direct docking supported
E3L026075
BDB026075
BDBM553415
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)OC4(C)COC4)C3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N5O5
607.605000
DLJAABWFGZUKQN-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553415
Local ready
Direct docking supported
E3L026076
BDB026076
BDBM553416
C[C@@H]1CN(c2cc(F)c(-c3ccc(CN4CCOCC4)s3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N5O3S
607.674000
XKWQKORAKAFTCV-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553416; PubChem:CID138541721
Local ready
Direct docking supported
E3L026077
BDB026077
BDBM553417
C[C@@H]1CN(c2cc(F)c(-c3cccs3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C24H24F4N4O2S
508.541000
TWPWLJZLYWEUMF-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553417; PubChem:CID137377606
Local ready
Direct docking supported
E3L026078
BDB026078
BDBM553418
C[C@@H]1CN(c2cc(F)c(-c3ccsc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C24H24F4N4O2S
508.541000
DVVJCUJJZQSETP-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553418; PubChem:CID137377151
Local ready
Direct docking supported
E3L026079
BDB026079
BDBM553419
C[C@@H]1CN(c2cc(F)c(-c3csc(CN4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N5O3S
607.674000
XDKALBSKVBTLTB-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553419; PubChem:CID137377191
Local ready
Direct docking supported
E3L026080
BDB026080
US11319299, Example 495
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)c(C(F)(F)F)c2)CCN1C
C27H29F4N7O3
575.567000
CNOQTQYXABKNQN-INIZCTEOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553420; PubChem:CID138551576
Local ready
Direct docking supported