E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L034941
BDB034941
BDBM701158
O=C(O)CN(c1ccc(N(CC(=O)O)S(=O)(=O)c2c(F)cccc2F)cc1)S(=O)(=O)c1c(F)cccc1F
C22H16F4N2O8S2
576.502000
OGEQGJXPMJDFOW-UHFFFAOYSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB
BindingDB:BDBM701158
Local ready
Direct docking supported
E3L034942
BDB034942
BDBM701159
O=C(O)CN(c1ccc(N(CC(=O)O)S(=O)(=O)c2ccc(Oc3ccccc3)cc2)cc1)S(=O)(=O)c1ccc(Oc2ccccc2)cc1
C34H28N2O10S2
688.736000
IBEJAJJDUUKCJU-UHFFFAOYSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB
BindingDB:BDBM701159
Local ready
Direct docking supported
E3L034943
BDB034943
BDBM701160
O=C(O)CN(c1ccc(N(CC(=O)O)S(=O)(=O)c2ccc3ccccc3c2)cc1)S(=O)(=O)c1ccc2ccccc2c1
C30H24N2O8S2
604.662000
GABPVRRWVDKCED-UHFFFAOYSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB
BindingDB:BDBM701160
Local ready
Direct docking supported
E3L034944
BDB034944
BDBM701161
COc1ccc(S(=O)(=O)N(Cc2nnn[nH]2)c2ccc(N(Cc3nnn[nH]3)S(=O)(=O)c3ccc(OC)cc3)cc2)cc1
C24H24N10O6S2
612.654000
QXLVOXWNYIEAEL-UHFFFAOYSA-N Q14145 Kelch-like ECH-associated protein 1
BindingDB
BindingDB:BDBM701161
Local ready
Direct docking supported
E3L034945
BDB034945
Pioglitazone
CCc1ccc(CCOc2ccc(CC3SC(=O)NC3=O)cc2)nc1
C19H20N2O3S
356.447000
HYAFETHFCAUJAY-UHFFFAOYSA-N P37231 Peroxisome proliferator-activated receptor gamma
BindingDB, PubChem
BindingDB:BDBM702010; PubChem:CID4829
Local ready
Direct docking supported
E3L034946
BDB034946
US20240365736, Example 11
COCCOCC1COCCN1Cc1ccc(COc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)cc1
C29H35N3O7
537.613000
STDUYDKQKZRBOM-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702899; PubChem:CID172496086
Local ready
Direct docking supported
E3L034947
BDB034947
US20240365736, Example 12
COCCCCC1COCCN1Cc1ccc(COc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)cc1
C30H37N3O6
535.641000
QYYOORVUGPOACD-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702900; PubChem:CID172878912
Local ready
Direct docking supported
E3L034948
BDB034948
US20240365736, Example 14
COCCNC(=O)C1CCCN(Cc2ccc(COc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)cc2)C1
C30H36N4O6
548.640000
UWWGSOMFLNRZAX-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702901; PubChem:CID172496076
Local ready
Direct docking supported
E3L034949
BDB034949
US20240365736, Example 16
COCCCC(=O)C1CCN(Cc2ccc(COc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)cc2)CC1
C31H37N3O6
547.652000
QTJKSTLCSWRPHO-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702902; PubChem:CID172878913
Local ready
Direct docking supported
E3L034950
BDB034950
US20240365736, Example 18
COCCNC(=O)C1CCN(Cc2ccc(COc3cccc4c3CN(C3CCC(=O)CC3=O)C4=O)cc2)C1
C30H35N3O6
533.625000
JYLGTOLSSAUPHO-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702903; PubChem:CID172878914
Local ready
Direct docking supported
E3L034951
BDB034951
US20240365736, Example 20
COCCOCC1CCN(Cc2ccc(COc3cccc4c3CN(C3CCC(=O)NC3=O)C4=O)cc2)CC1
C30H37N3O6
535.641000
VUUXCYIPKCHKFI-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702904; PubChem:CID172496070
Local ready
Direct docking supported
E3L034952
BDB034952
US20240365736, Example 21
COCCOc1cc(OCc2ccc(CN3CCOCC3)cc2)c2c(c1)C(=O)N(C1CCC(=O)NC1=O)C2
C28H33N3O7
523.586000
PJBNYZZSTZBBMG-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702905; PubChem:CID172496084
Local ready
Direct docking supported
E3L034953
BDB034953
US20240365736, Example 22
COCCCc1cc(COc2cccc3c2CN(C2CCC(=O)NC2=O)C3=O)ccc1CN1CCOCC1
C29H35N3O6
521.614000
CAOFXMJQXIJBGC-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702906; PubChem:CID172878915
Local ready
Direct docking supported
E3L034954
BDB034954
US20240365736, Example 23
COCCNc1cc(CN2CCOCC2)ccc1COc1cccc2c1CN(C1CCC(=O)NC1=O)C2=O
C28H34N4O6
522.602000
RGHRTUBGGRCNQN-UHFFFAOYSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702907; PubChem:CID172496067
Local ready
Direct docking supported
E3L034955
BDB034955
US20240365736, Example 24
COCCCC(=O)c1cc(COc2cccc3c2CN([C@H]2CCC(=O)NC2=O)C3=O)ccc1CN1CCOCC1
C30H35N3O7
549.624000
FHKFSHQHPBCJDY-VWLOTQADSA-N Q96SW2 Protein cereblon
BindingDB, PubChem
BindingDB:BDBM702908; PubChem:CID172878916
Local ready
Direct docking supported
E3L034956
BDB034956
US20240368153, Example 1-1
Cc1cc(N)nc2cc(-c3ccccc3)cnc12
C15H13N3
235.290000
CDSMVLOAJAFUKK-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703854; PubChem:CID172487122
Local ready
Direct docking supported
E3L034957
BDB034957
US20240368153, Example 1-2
Cc1cc(N)nc2cc(-c3ccccn3)cnc12
C14H12N4
236.278000
XGARVOSZCBNAAT-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703871; PubChem:CID172487097
Local ready
Direct docking supported
E3L034958
BDB034958
US20240368153, Example 1-3
Cc1cc(N)nc2cc(-c3cccnc3)cnc12
C14H12N4
236.278000
PJNYMJYHWXXOBJ-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703885; PubChem:CID167289044
Local ready
Direct docking supported
E3L034959
BDB034959
US20240368153, Example 1-4
Cc1cc(N)nc2cc(-c3cccnn3)cnc12
C13H11N5
237.266000
HXIPASNYKUHCAT-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703886; PubChem:CID172487064
Local ready
Direct docking supported
E3L034960
BDB034960
US20240368153, Example 1-5
Cc1cc(N)nc2cc(-c3ccsn3)cnc12
C12H10N4S
242.307000
ILRUNGHBIYFCTN-UHFFFAOYSA-N Q9BQA1 Protein arginine N-methyltransferase 5
BindingDB, PubChem
BindingDB:BDBM703887; PubChem:CID166460453
Local ready
Direct docking supported