E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L041081
BDB041081
US20250289799, Example 24
CC(C)c1ccccc1-c1ncc2c(n1)N(CC1CCN(c3nc(C(F)(F)F)cn3C)CC1)C(=O)CO2
C26H29F3N6O2
514.552000
YZUBMVZJIYLDLJ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771882; PubChem:CID176244100
Local ready
Direct docking supported
E3L041082
BDB041082
US20250289799, Example 25
CC(C)c1ccccc1-c1ncc(C(F)(F)F)c(NCC2CCN(c3nc(C(F)(F)F)cn3C)CC2)n1
C25H28F6N6
526.529000
GWVBQRLHRASJCD-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771883; PubChem:CID176244145
Local ready
Direct docking supported
E3L041083
BDB041083
US20250289799, Example 26
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCc1ccc(-n2nc(C(F)(F)F)cc2C)cc1
C25H24F3N7O2
511.508000
MGWPSNSQUYAKGH-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771884; PubChem:CID176244318
Local ready
Direct docking supported
E3L041084
BDB041084
US20250289799, Example 27
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCc1ccc(-c2nccn3ccnc23)cc1
C26H24N8O2
480.532000
UABPBADOLVMDIH-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771885; PubChem:CID176244130
Local ready
Direct docking supported
E3L041085
BDB041085
US20250289799, Example 28
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCC12CCC(c3ccc(C(F)(F)F)cn3)(CC1)CC2
C28H31F3N6O2
540.590000
ABUACTIZORDXRT-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771886; PubChem:CID177269278
Local ready
Direct docking supported
E3L041086
BDB041086
US20250289799, Example 29
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C25H24F3N7O2
511.508000
GUVUYALCVUAQLY-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771887; PubChem:CID176244111
Local ready
Direct docking supported
E3L041087
BDB041087
US20250289799, Example 30
COc1ncnc(C2CC2)c1-c1ncc2c(n1)N(CC1CCN(c3nc(C(F)(F)F)cn3C)CC1)C(=O)CO2
C25H27F3N8O3
544.538000
WSZCEHJUCDSGHN-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771888; PubChem:CID176244103
Local ready
Direct docking supported
E3L041088
BDB041088
US20250289799, Example 32
CC(C)c1ccccc1-c1nc(NCc2ccc(-c3ccccn3)cc2)c2occc2n1
C27H24N4O
420.516000
CDOBKBJITRLYHK-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771889; PubChem:CID170316882
Local ready
Direct docking supported
E3L041089
BDB041089
US20250289799, Example 33
CC(C)c1ccccc1-c1nc(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)c2occc2n1
C27H24F3N5O
491.517000
YGCPCELOCNSUOX-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771890; PubChem:CID176244129
Local ready
Direct docking supported
E3L041090
BDB041090
US20250289799, Example 34
COc1ncnc(C2CC2)c1-c1nc(NCc2ccc(-c3ccccn3)cc2)c2occc2n1
C26H22N6O2
450.502000
FUILBVIYSXMSRX-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771891; PubChem:CID176244219
Local ready
Direct docking supported
E3L041091
BDB041091
US20250289799, Example 35
COc1ncnc(C2CC2)c1-c1nc(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)c2occc2n1
C26H22F3N7O2
521.503000
AWLAWJHEVPPSKK-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771892; PubChem:CID176244090
Local ready
Direct docking supported
E3L041092
BDB041092
US20250289799, Example 36
CC(C)c1ccccc1-c1nc(NCc2ccc(-c3ccccn3)cc2)c2[nH]ccc2n1
C27H25N5
419.532000
XOFAOBUJVLMYQJ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771893; PubChem:CID176244118
Local ready
Direct docking supported
E3L041093
BDB041093
US20250289799, Example 37
COc1ncnc(C2CC2)c1-c1nc(NCc2ccc(-c3ccccn3)cc2)c2[nH]ccc2n1
C26H23N7O
449.518000
PPSJXZQVBVKSBJ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771894; PubChem:CID176244162
Local ready
Direct docking supported
E3L041094
BDB041094
US20250289799, Example 38
CC(C)c1ccccc1-c1ncc(C#N)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C26H23F3N6
476.506000
IECVALNNFYDFDL-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771895; PubChem:CID165406236
Local ready
Direct docking supported
E3L041095
BDB041095
US20250289799, Example 38
CC(C)c1ccccc1-c1ncc(C#N)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C26H23F3N6
476.506000
IECVALNNFYDFDL-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771896; PubChem:CID165406236
Local ready
Direct docking supported
E3L041096
BDB041096
US20250289799, Example 40
CC(C)c1ccccc1-c1nc(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)c2ncccc2n1
C28H25F3N6
502.544000
LNLCPDZGLXKIFI-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771897; PubChem:CID176244146
Local ready
Direct docking supported
E3L041097
BDB041097
US20250289799, Example 41
COc1cnc(-c2ccccc2C(C)C)nc1NCc1ccc2c(c1)CN(C1CCC(=O)NC1=O)C2=O
C28H29N5O4
499.571000
FUJBQMDQMGTBEO-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771898; PubChem:CID176244135
Local ready
Direct docking supported
E3L041098
BDB041098
US20250289799, Example 50
COc1ncnc(C2CC2)c1-c1nc(NCc2ccc(-n3nc(C(F)(F)F)cc3C)cc2)c2occc2n1
C26H22F3N7O2
521.503000
GCJRMTHRUBHEIJ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771899; PubChem:CID176244150
Local ready
Direct docking supported
E3L041099
BDB041099
US20250289799, Example 57
Cc1cc(C(F)(F)F)nn1-c1ccc(CNc2nc(-c3ccccc3C(C)C)nc3ccoc23)cc1
C27H24F3N5O
491.517000
MQEUBGQUDPWPDS-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771900; PubChem:CID176244128
Local ready
Direct docking supported
E3L041100
BDB041100
US20250289799, Example 61
COc1cnc(-c2ccccc2C(C)C)nc1N(C)CC1CCC(c2ccccn2)CC1
C27H34N4O
430.596000
CPALDWUNJYGGLG-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771901; PubChem:CID175444698
Local ready
Direct docking supported