E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L041101
BDB041101
US20250289799, Example 62
COc1cnc(-c2ccccc2C(C)C)nc1N(C)CC1CCN(c2nc(C(F)(F)F)cn2C)CC1
C26H33F3N6O
502.585000
KSBAHZNCYBJXGZ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771902; PubChem:CID176244120
Local ready
Direct docking supported
E3L041102
BDB041102
US20250289799, Example 63
COc1cnc(-c2ccccc2C(C)C)nc1NCC1CCC(c2ccccn2)CC1
C26H32N4O
416.569000
LUOJDMDAHOHUQE-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771903; PubChem:CID176244234
Local ready
Direct docking supported
E3L041103
BDB041103
US20250289799, Example 64
COc1cnc(-c2ccccc2C(C)C)nc1NCc1ccc(-c2ccccn2)cc1
C26H26N4O
410.521000
VQFCZYWIHDUCDO-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771904; PubChem:CID176244250
Local ready
Direct docking supported
E3L041104
BDB041104
US20250289799, Example 65
COc1cnc(-c2ccccc2C(C)C)nc1NCC1CCN(c2nc(C(F)(F)F)cn2C)CC1
C25H31F3N6O
488.558000
ZLESCTLYTHEAOI-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771905; PubChem:CID176244307
Local ready
Direct docking supported
E3L041105
BDB041105
US20250289799, Example 66
COc1cnc(-c2ccccc2C(C)C)nc1NCc1ccc(-c2ccc(C)cn2)cc1
C27H28N4O
424.548000
LQSFUFNARNYQDQ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771906; PubChem:CID176244182
Local ready
Direct docking supported
E3L041106
BDB041106
US20250289799, Example 67
COc1cnc(-c2ccccc2C(C)C)nc1NCc1ccc(OCc2ccccn2)cc1
C27H28N4O2
440.547000
DQLQLFNWTQBOPA-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771907; PubChem:CID176244139
Local ready
Direct docking supported
E3L041107
BDB041107
US20250289799, Example 68
CCOCCOc1ccc(CNc2nc(-c3ccccc3C(C)C)ncc2OC)cc1
C25H31N3O3
421.541000
KMRFRQIVZPNTCB-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771908; PubChem:CID176244273
Local ready
Direct docking supported
E3L041108
BDB041108
US20250289799, Example 69
COc1cc(CNc2nc(-c3ccccc3C(C)C)ncc2OC)ccc1-n1nc(C(F)(F)F)cc1C
C27H28F3N5O2
511.548000
IVLUJVHHAGCAJL-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771909; PubChem:CID176244093
Local ready
Direct docking supported
E3L041109
BDB041109
US20250289799, Example 70
CC(C)Oc1cnc(-c2ccccc2C(C)C)nc1N(C)CC1CCN(c2nc(C(F)(F)F)cn2C)CC1
C28H37F3N6O
530.639000
BILZOJNMERVIPN-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771910; PubChem:CID176244168
Local ready
Direct docking supported
E3L041110
BDB041110
US20250289799, Example 71
CC(C)Oc1cnc(-c2ccccc2C(C)C)nc1N(C)Cc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C29H32F3N5O
523.603000
XHBMBVUKKCOXII-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771911; PubChem:CID176244243
Local ready
Direct docking supported
E3L041111
BDB041111
US20250289799, Example 72
CC(C)Oc1cnc(-c2ccccc2C(C)C)nc1NCC1CCN(c2nc(C(F)(F)F)cn2C)CC1
C27H35F3N6O
516.612000
GMDOICJFPHZINJ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771912; PubChem:CID176244281
Local ready
Direct docking supported
E3L041112
BDB041112
US20250289799, Example 73
CC(C)Oc1cnc(-c2ccccc2C(C)C)nc1NCc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C28H30F3N5O
509.576000
XWCWKBLMQAMNMQ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771913; PubChem:CID176244164
Local ready
Direct docking supported
E3L041113
BDB041113
US20250289799, Example 74
CC(C)Oc1cnc(-c2ccccc2C(C)C)nc1NCC12CCC(c3ccc(C(F)(F)F)cn3)(CC1)CC2
C31H37F3N4O
538.658000
DSJYMTJZBFSCGI-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771914; PubChem:CID176244108
Local ready
Direct docking supported
E3L041114
BDB041114
US20250289799, Example 25
CC(C)c1ccccc1-c1ncc(C(F)(F)F)c(NCC2CCN(c3nc(C(F)(F)F)cn3C)CC2)n1
C25H28F6N6
526.529000
GWVBQRLHRASJCD-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771915; PubChem:CID176244145
Local ready
Direct docking supported
E3L041115
BDB041115
US20250289799, Example 76
CC(C)c1ccccc1-c1ncc(C(F)(F)F)c(NCC2CCN(c3ccccn3)CC2)n1
C25H28F3N5
455.528000
VBBYRXYMOQJZPK-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771916; PubChem:CID176244112
Local ready
Direct docking supported
E3L041116
BDB041116
US20250289799, Example 77
CC(C)c1ccccc1-c1nc(NCc2ccc3c(c2)CCN(C)C3=O)c2occc2n1
C26H26N4O2
426.520000
IWUYLZJTWCWSGY-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771917; PubChem:CID176244194
Local ready
Direct docking supported
E3L041117
BDB041117
US20250289799, Example 78
CC(C)c1ccccc1-c1nc(NCc2ccc3c(c2)CCN(C(C)C)C3=O)c2occc2n1
C28H30N4O2
454.574000
UQYGBEHVVXOPBR-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771918; PubChem:CID176244159
Local ready
Direct docking supported
E3L041118
BDB041118
US20250289799, Example 79
CCOCCOc1ccc(CNc2nc(-c3ccccc3C(C)C)nc3ccoc23)cc1
C26H29N3O3
431.536000
ODOPLSZJERKDBL-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771919; PubChem:CID176244089
Local ready
Direct docking supported
E3L041119
BDB041119
US20250289799, Example 80
COC1CC(Oc2ccc(CNc3nc(-c4ccccc4C(C)C)nc4ccoc34)cc2)C1
C27H29N3O3
443.547000
ARAJFCDWIZGRMF-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771920; PubChem:CID176244165
Local ready
Direct docking supported
E3L041120
BDB041120
US20250289799, Example 81
COc1cc(-c2nc(C(F)(F)F)cn2C)ccc1CNc1nc(-c2ccccc2C(C)C)nc2ccoc12
C28H26F3N5O2
521.543000
QZOUMWWCRNMTFD-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771921; PubChem:CID176244147
Local ready
Direct docking supported