E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L041121
BDB041121
US20250289799, Example 82
COc1cc(CNc2nc(-c3ccccc3C(C)C)nc3ccoc23)ccc1-c1nc(C(F)(F)F)cn1C
C28H26F3N5O2
521.543000
LVYZQLKHUFVKJA-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771922; PubChem:CID176244229
Local ready
Direct docking supported
E3L041122
BDB041122
US20250289799, Example 83
COc1cc(-n2nc(C(F)(F)F)cc2C)ccc1CNc1nc(-c2ccccc2C(C)C)nc2ccoc12
C28H26F3N5O2
521.543000
QZQRPSWKVFRMAR-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771923; PubChem:CID176244286
Local ready
Direct docking supported
E3L041123
BDB041123
US20250289799, Example 84
COc1cc(CNc2nc(-c3ccccc3C(C)C)nc3ccoc23)ccc1-n1nc(C(F)(F)F)cc1C
C28H26F3N5O2
521.543000
SIOQUJKMCMRGKJ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771924; PubChem:CID176244153
Local ready
Direct docking supported
E3L041124
BDB041124
US20250289799, Example 85
C#Cc1cnc(-c2ccccc2C(C)C)nc1NCc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C27H24F3N5
475.518000
MLSWUXJGLQVYPB-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771925; PubChem:CID176244116
Local ready
Direct docking supported
E3L041125
BDB041125
US20250289799, Example 86
CC(C)c1ccccc1-c1ncc(OC(F)F)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C26H24F5N5O
517.502000
MDNLSVZCADUZRA-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771926; PubChem:CID176244140
Local ready
Direct docking supported
E3L041126
BDB041126
US20250289799, Example 87
CC(C)c1ccccc1-c1ncc(N2CCOCC2)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C29H31F3N6O
536.602000
GFRSKJKFRWTEFP-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771927; PubChem:CID176244304
Local ready
Direct docking supported
E3L041127
BDB041127
US20250289799, Example 88
CC(C)c1ccccc1-c1ncc(N2CCN(C)CC2)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C30H34F3N7
549.645000
ADVIRJZRMRVCGM-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771928; PubChem:CID176244223
Local ready
Direct docking supported
E3L041128
BDB041128
US20250289799, Example 89
CC(C)c1ccccc1-c1ncc(O)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C25H24F3N5O
467.495000
YDBALLYLPVOBKL-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771929; PubChem:CID165406174
Local ready
Direct docking supported
E3L041129
BDB041129
US20250289799, Example 89
CC(C)c1ccccc1-c1ncc(O)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C25H24F3N5O
467.495000
YDBALLYLPVOBKL-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771930; PubChem:CID165406174
Local ready
Direct docking supported
E3L041130
BDB041130
US20250289799, Example 91
COC(=O)Cc1cnc(-c2ccccc2C(C)C)nc1NCc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C28H28F3N5O2
523.559000
PVMJYWNDGDXJAE-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771931; PubChem:CID176244172
Local ready
Direct docking supported
E3L041131
BDB041131
US20250289799, Example 92
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1N(C)CC1CCN(c2nc(C(F)(F)F)cn2C)CC1
C25H31F3N8O2
532.571000
LXNVEIWSRUSHHU-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771932; PubChem:CID176244094
Local ready
Direct docking supported
E3L041132
BDB041132
US20250289799, Example 93
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1N(C)Cc1ccc(-c2nc(C(F)(F)F)cn2C(C)C)cc1
C28H30F3N7O2
553.589000
XHARODXCKIWDRS-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771933; PubChem:CID176244132
Local ready
Direct docking supported
E3L041133
BDB041133
US20250289799, Example 94
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCc1ccc(-c2ccccn2)cc1
C25H24N6O2
440.507000
AYJAZCDTLQXCIM-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771934; PubChem:CID176244086
Local ready
Direct docking supported
E3L041134
BDB041134
US20250289799, Example 95
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCC1CCN(c2nc(C(F)(F)F)cn2C)CC1
C24H29F3N8O2
518.544000
AQGJCMOJKXVHOM-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771935; PubChem:CID176244174
Local ready
Direct docking supported
E3L041135
BDB041135
US20250289799, Example 29
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C25H24F3N7O2
511.508000
GUVUYALCVUAQLY-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771936; PubChem:CID176244111
Local ready
Direct docking supported
E3L041136
BDB041136
US20250289799, Example 97
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCc1ccc2c(c1)CCN(C(C)C)C2=O
C26H30N6O3
474.565000
CXZSWVMSSIIGEW-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771937; PubChem:CID176244230
Local ready
Direct docking supported
E3L041137
BDB041137
US20250289799, Example 98
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCc1ccc(OCc2ccccn2)cc1
C26H26N6O3
470.533000
MBZOEDFQWZTTGX-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771938; PubChem:CID176244295
Local ready
Direct docking supported
E3L041138
BDB041138
US20250289799, Example 99
CCOCCOc1ccc(CNc2nc(-c3c(OC)ncnc3C3CC3)ncc2OC)cc1
C24H29N5O4
451.527000
YEFXKMIUOCCOSN-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771939; PubChem:CID176244195
Local ready
Direct docking supported
E3L041139
BDB041139
US20250289799, Example 100
COc1cc(-c2nc(C(F)(F)F)cn2C)ccc1CNc1nc(-c2c(OC)ncnc2C2CC2)ncc1OC
C26H26F3N7O3
541.534000
RTBGYULEUIBEGG-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771940; PubChem:CID176244247
Local ready
Direct docking supported
E3L041140
BDB041140
US20250289799, Example 101
COc1cc(CNc2nc(-c3c(OC)ncnc3C3CC3)ncc2OC)ccc1-c1nc(C(F)(F)F)cn1C
C26H26F3N7O3
541.534000
DZLBSNGAHUWGOT-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771941; PubChem:CID176244233
Local ready
Direct docking supported