E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L010161
BDB010161
BDBM221508
CC(C)CC(=O)Nc1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C25H29F3N6O3
518.540000
SZSHBATUGFKWTI-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221508; PubChem:CID90318155
Local ready
Direct docking supported
E3L010162
BDB010162
BDBM221509
C[C@@H](Nc1nc(C(=O)O)nc2nc(NC(=O)C3CCCCC3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H31F3N6O3
544.578000
XYLAQQXPJGQPCS-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221509; PubChem:CID90325220
Local ready
Direct docking supported
E3L010163
BDB010163
BDBM221510
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCCC3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C31H33F3N6O2
578.639000
SFLNTGXSHSRWMQ-PHSANKKPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221510; PubChem:CID90325218
Local ready
Direct docking supported
E3L010164
BDB010164
BDBM221511
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCC(C)(C)C3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H33F3N6O2
530.595000
JXJPFOFDLGTIHV-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221511; PubChem:CID90318348
Local ready
Direct docking supported
E3L010165
BDB010165
BDBM221512
CC(C)C1CCCN(c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)C1
C28H35F3N6O2
544.622000
HWFYQMQWMPUXLC-DIAVIDTQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221512; PubChem:CID90325075
Local ready
Direct docking supported
E3L010166
BDB010166
BDBM221514
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCCC3c3ccccc3)n(Cc3ccc(C(F)(F)F)c(F)c3)c12)C1CCC1
C31H32F4N6O2
596.629000
MRPAFWOBMOAUGY-QFADGXAASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221514; PubChem:CID90325073
Local ready
Direct docking supported
E3L010167
BDB010167
BDBM221515
CCCN(c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1)[C@@H](C)c1ccccc1
C31H35F3N6O2
580.655000
XMAAVVTUAVHOBW-UXHICEINSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221515; PubChem:CID90325072
Local ready
Direct docking supported
E3L010168
BDB010168
BDBM221516
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCOC[C@H]3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C30H31F3N6O3
580.611000
LSBWIAKFVFQASP-JPYJTQIMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221516; PubChem:CID90325076
Local ready
Direct docking supported
E3L010169
BDB010169
BDBM221536
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCOC[C@@H]3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C30H31F3N6O3
580.611000
LSBWIAKFVFQASP-WZONZLPQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221536; PubChem:CID90318932
Local ready
Direct docking supported
E3L010170
BDB010170
BDBM221680
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCC3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C30H31F3N6O2
564.612000
GGVYFLFTMZSDDI-FKSKYRLFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221680; PubChem:CID90318401
Local ready
Direct docking supported
E3L010171
BDB010171
BDBM221682
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCCC3c3ccccn3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C30H32F3N7O2
579.627000
HEJQXUJIETURET-FKSKYRLFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221682; PubChem:CID90318601
Local ready
Direct docking supported
E3L010172
BDB010172
BDBM221687
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCC3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C29H29F3N6O2
550.585000
MDSTWEIDNQJJLK-PLEWWHCXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221687; PubChem:CID90318322
Local ready
Direct docking supported
E3L010173
BDB010173
BDBM221693
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCOCC3c3ccccc3)n(Cc3ccc(C(F)(F)F)c(F)c3)c12)C1CCC1
C31H30F4N8O3
638.626000
ILWMDUVWANWQHF-LIXIDFRTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221693; PubChem:CID136632431
Local ready
Direct docking supported
E3L010174
BDB010174
BDBM221697
C[C@@H](Nc1nc(-c2noc(=O)[nH]2)nc2nc(N3CCOC[C@H]3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C31H31F3N8O3
620.636000
VWSJJNFRCXESKD-JPYJTQIMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221697; PubChem:CID136632657
Local ready
Direct docking supported
E3L010175
BDB010175
BDBM221700
CC[C@@H](c1ccccc1)N(C)c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C30H33F3N6O2
566.628000
BPULDNLATADUJH-JPYJTQIMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221700; PubChem:CID90324999
Local ready
Direct docking supported
E3L010176
BDB010176
BDBM221701
Cc1cc(C)n(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)n1
C25H26F3N7O2
513.524000
DEVPRFUNLBUDBI-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221701; PubChem:CID90318115
Local ready
Direct docking supported
E3L010177
BDB010177
BDBM221702
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCC3c3cccc(F)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C30H30F4N6O2
582.602000
AOFCVULZYGZTNB-LIXIDFRTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221702; PubChem:CID90325000
Local ready
Direct docking supported
E3L010178
BDB010178
BDBM221703
Cc1cc(-c2ccccc2)nn1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(C(F)(F)F)cc1
C30H28F3N7O2
575.595000
MIIUEHHYRGDJPK-GOSISDBHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221703; PubChem:CID90318072
Local ready
Direct docking supported
E3L010179
BDB010179
BDBM221704
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCC[C@@H]3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C31H33F3N6O2
578.639000
SFLNTGXSHSRWMQ-NTKDMRAZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221704; PubChem:CID90324998
Local ready
Direct docking supported
E3L010180
BDB010180
BDBM221712
C[C@@H](Nc1nc(C(=O)O)nc2nc(N3CCCC[C@H]3c3ccccc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C31H33F3N6O2
578.639000
SFLNTGXSHSRWMQ-DVECYGJZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM221712; PubChem:CID90318705
Local ready
Direct docking supported