E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L001401
BDB001401
Isoindolinone scaffold, 64
CCCN1C(=O)c2ccccc2C1(OCc1cc([N+](=O)[O-])c(C)c([N+](=O)[O-])c1)c1ccc(OCOCC[Si](C)(C)C)cc1
C31H37N3O8Si
607.736000
JFQSWXHKGFHDGF-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31269; PubChem:CID44176167
Local ready
Direct docking supported
E3L001402
BDB001402
Isoindolinone scaffold, 65
CC(=O)NCCN1C(=O)c2ccccc2C1(OCc1ccc(C(C)(C)C)cc1)c1ccccc1
C29H32N2O3
456.586000
BTICYABAFSUXAA-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31270; PubChem:CID16090412
Local ready
Direct docking supported
E3L001403
BDB001403
Isoindolinone scaffold, 67
C=C(C)C(=O)OCCN1C(=O)c2ccccc2C1(N[C@@H](CO)[C@@H](O)c1ccccc1)c1ccccc1
C29H30N2O5
486.568000
WXRBVJFGGFIGTQ-QEGCZXFXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31271; PubChem:CID44176168
Local ready
Direct docking supported
E3L001404
BDB001404
BDBM31272
c1ccc(C(N=Nc2nc3ccccc3s2)c2ccccn2)cc1
C19H14N4S
330.416000
XYTANBRTRZCNAC-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31272; PubChem:CID91896126
Local ready
Direct docking supported
E3L001405
BDB001405
Chalcone derivative, A
O=C(O)COc1ccc(/C=C/C(=O)c2ccc(Cl)cc2)cc1
C17H13ClO4
316.740000
UFSLJQCZRHNOAH-XCVCLJGOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31273; PubChem:CID5988917
Local ready
Direct docking supported
E3L001406
BDB001406
BDBM31274
O=C(O)COc1ccc(/C=C/C(=O)c2ccc(Cl)c(Cl)c2)cc1
C17H12Cl2O4
351.185000
HYBWERCTQJOGFB-FPYGCLRLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31274; PubChem:CID8856777
Local ready
Direct docking supported
E3L001407
BDB001407
BDBM31275
O=C(O)COc1ccc(C(=O)/C=C/c2ccc(Cl)c(Cl)c2)cc1
C17H12Cl2O4
351.185000
DCUDBWMZJBOZAB-KRXBUXKQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31275; PubChem:CID7067864
Local ready
Direct docking supported
E3L001408
BDB001408
Chalcone derivative, C
CC(C)(Oc1ccc(/C=C/C(=O)c2ccc(Cl)cc2)cc1)C(=O)O
C19H17ClO4
344.794000
AICGQCAOHPDKQH-LFYBBSHMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31276; PubChem:CID14126638
Local ready
Direct docking supported
E3L001409
BDB001409
2-Benzyl-2,3-dihydro-1H-naphtho(1,2-e)(1,3)oxazin-9-ol
Oc1ccc2ccc3c(c2c1)CN(Cc1ccccc1)CO3
C19H17NO2
291.350000
CLOONOJPKIVAIE-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31277; PubChem:CID259166
Local ready
Direct docking supported
E3L001410
BDB001410
Chalcone derivative, E
CCOC(=O)C(C)(C)Oc1ccc(CCNC(=O)/C=C/C(=O)c2ccc(Cl)cc2)cc1
C24H26ClNO5
443.927000
PSLJGGRDWMUPLT-BUHFOSPRSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31278; PubChem:CID17783233
Local ready
Direct docking supported
E3L001411
BDB001411
Chalcone derivative, F
O=C(CC(=Nc1ccccc1)c1ccccc1)Nc1ccccc1
C21H18N2O
314.388000
ZJGCTZFATLFZFS-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31279; PubChem:CID12871998
Local ready
Direct docking supported
E3L001412
BDB001412
Chalcone derivative, G
CCOc1ccc(NC(=O)CC(=Nc2ccccc2)c2ccccc2)cc1
C23H22N2O2
358.441000
WHAMZFYDMJTIKX-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31280; PubChem:CID44176169
Local ready
Direct docking supported
E3L001413
BDB001413
Chalcone derivative, H
O=C(C(=S)Nc1ccccc1)C(C=Nc1ccccc1)c1ccccc1
C22H18N2OS
358.466000
WSOXYTIBSUTHGB-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31281; PubChem:CID91896127
Local ready
Direct docking supported
E3L001414
BDB001414
Chalcone derivative, L
CCC(C)Cc1ccc(OCC(=O)O)c(Cl)c1Cl
C13H16Cl2O3
291.174000
PCRBZOCSBMHOTP-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31282; PubChem:CID44176171
Local ready
Direct docking supported
E3L001415
BDB001415
BDBM31283
O=C(O)COc1c(Br)cc(/C=C/C(=O)c2ccc3ccccc3c2)cc1Br
C21H14Br2O4
490.147000
MBAPQUAKCNYSCD-VMPITWQZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31283; PubChem:CID5709454
Local ready
Direct docking supported
E3L001416
BDB001416
BDBM31284
CC(C)Oc1ccc(C(=O)NS(=O)(=O)c2ccc(N=Nc3c(O)n(-c4ccccc4)n(-c4ccccc4)c3=O)cc2)cc1
C31H27N5O6S
597.653000
ZJITYUYLFDQEPQ-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31284; PubChem:CID322340
Local ready
Direct docking supported
E3L001417
BDB001417
BDBM31285
O=C(O)[C@H](c1ccc(Cl)cc1)N1C(=O)c2cc(I)ccc2NC(=O)[C@@H]1c1ccc(Cl)cc1
C23H15Cl2IN2O4
581.193000
HQEQUYKKMMKSSX-PMACEKPBSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31285; PubChem:CID656933
Local ready
Direct docking supported
E3L001418
BDB001418
Benzodiazepinedione, 2
O=C(O)[C@@H](c1ccc(Cl)cc1)N1C(=O)c2cc(I)ccc2NC(=O)[C@H]1c1ccc(Cl)cc1
C23H15Cl2IN2O4
581.193000
HQEQUYKKMMKSSX-WOJBJXKFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31286; PubChem:CID11250180
Local ready
Direct docking supported
E3L001419
BDB001419
1,4-Benzodiazepine-2,5-dione scaffold, 52
Nc1cc(Cl)ccc1CN1C(=O)c2cc(I)ccc2N(CCCCC(=O)O)C(=O)[C@@H]1c1ccc(Cl)cc1
C27H24Cl2IN3O4
652.316000
GTYWDSONJKDRTC-VWLOTQADSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31287; PubChem:CID44176172
Local ready
Direct docking supported
E3L001420
BDB001420
1,4-Benzodiazepine-2,5-dione scaffold, 2
C[C@H](c1ccc(Cl)cc1N)N1C(=O)c2cc(I)ccc2N(CCCCC(=O)O)C(=O)[C@@H]1c1ccc(Cl)cc1
C28H26Cl2IN3O4
666.343000
SAGXSWWCECPDLO-DXPJPUQTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM31288; PubChem:CID11952783
Local ready
Direct docking supported