E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L019321
BDB019321
US10717742, Example Ib-245
O=C1Nc2cc(Cl)ccc2[C@@]12[C@@H](c1cccc(Cl)c1F)[C@@H]1c3nc4cc(CO)ccc4n3CC[C@@H]1N2CC1CC1
C31H27Cl2FN4O2
577.487000
CTOJEFCFWPGXRQ-OVDFTCDZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454508; PubChem:CID129028792
Local ready
Direct docking supported
E3L019322
BDB019322
US10717742, Example Ib-247
Nc1ccc2c(c1)nc1n2CC[C@H]2[C@@H]1[C@H](c1cccc(Cl)c1F)[C@]1(C(=O)Nc3cc(Cl)ccc31)N2CC1CC1
C30H26Cl2FN5O
562.476000
JSHQYIJKZVUJGY-YRIIQKNPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454509; PubChem:CID129028617
Local ready
Direct docking supported
E3L019323
BDB019323
US10717742, Example Ib-249
O=C1Nc2cc(Cl)ccc2[C@@]12[C@@H](c1cccc(Cl)c1F)[C@@H]1c3nc4cc(N5CCCCC5)ccc4n3CC[C@@H]1N2CC1CC1
C35H34Cl2FN5O
630.595000
AAYGWYQEYZBJKG-XYIJYTLJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454510; PubChem:CID129028688
Local ready
Direct docking supported
E3L019324
BDB019324
US10717742, Example Ib-251
CN(C)c1ccc2c(c1)nc1n2CC[C@H]2[C@@H]1[C@H](c1cccc(Cl)c1F)[C@]1(C(=O)Nc3cc(Cl)ccc31)N2CC1CC1
C32H30Cl2FN5O
590.530000
GUUUZGZRJUBSAF-CKXMCULTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454511; PubChem:CID129264211
Local ready
Direct docking supported
E3L019325
BDB019325
US10717742, Example Ib-253
O=C1Nc2cc(Cl)ccc2[C@@]12[C@@H](c1cccc(Cl)c1F)[C@@H]1c3nc4ccccc4n3CC[C@@H]1N2CC1CC1
C30H25Cl2FN4O
547.461000
JTKUVLDEHMCGQW-YRIIQKNPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454512; PubChem:CID129029219
Local ready
Direct docking supported
E3L019326
BDB019326
US10717742, Example Ic-23
Cc1c(C(=O)O)ccn2c3c(nc12)[C@@H]1[C@H](C3)N(CC2CC2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1ccnc(Cl)c1F
C30H24Cl2FN5O3
592.458000
WYJMIVPQJUNUNX-VGOFXERVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454513; PubChem:CID129264227
Local ready
Direct docking supported
E3L019327
BDB019327
US10717742, Example Ic-27
CCOc1cccc(CN2[C@H]3Cc4c(nc5c(C)c(C(=O)O)ccn45)[C@H]3[C@H](c3ccnc(Cl)c3F)[C@]23C(=O)Nc2cc(Cl)ccc23)c1
C35H28Cl2FN5O4
672.544000
DTVLWGMVHOGLSO-AVHAMUGWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454514; PubChem:CID129264228
Local ready
Direct docking supported
E3L019328
BDB019328
US10717742, Example Ic-29
Cc1c(C(=O)N(C)C)ccn2c3c(nc12)[C@@H]1[C@H](C3)N(CC2CC2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1ccnc(Cl)c1F
C32H29Cl2FN6O2
619.528000
CSHODZSCWAPMPB-ABRUIRNFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454515; PubChem:CID129029054
Local ready
Direct docking supported
E3L019329
BDB019329
US10717742, Example Ic-35
Cc1c(C(=O)N2CCCCC2)ccn2c3c(nc12)[C@@H]1[C@H](C3)N(CC2CC2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1ccnc(Cl)c1F
C35H33Cl2FN6O2
659.593000
IPYNLJVDKFLGJX-AVHAMUGWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454516; PubChem:CID129029175
Local ready
Direct docking supported
E3L019330
BDB019330
US10717742, Example Ic-37
Cc1c(C(=O)N2CCOCC2)ccn2c3c(nc12)[C@@H]1[C@H](C3)N(CC2CC2)[C@@]2(C(=O)Nc3cc(Cl)ccc32)[C@H]1c1ccnc(Cl)c1F
C34H31Cl2FN6O3
661.565000
KOBNYQIMBHCJII-YFOJAKRDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM454517; PubChem:CID129264230
Local ready
Direct docking supported
E3L019331
BDB019331
US10717746, Example 2
CC(=O)N[C@@H]1CCC[C@H](C(=O)Nc2cc(-c3cnn4c3CCCC4)c(Cl)cn2)C1
C21H26ClN5O2
415.925000
AKIBGBJFUGFCIJ-LSDHHAIUSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM454519; PubChem:CID124155310
Local ready
Direct docking supported
E3L019332
BDB019332
US10717746, Example 25
CC(=O)N[C@@H]1CCC[C@H](C(=O)Nc2cc(-c3cnn4c3CC(C)(C)C4)c(F)cn2)C1
C22H28FN5O2
413.497000
JTIFUJUJDWUQEV-LSDHHAIUSA-N P51948 Cyclin-H
BindingDB, PubChem
BindingDB:BDBM454542; PubChem:CID124155169
Local ready
Direct docking supported
E3L019333
BDB019333
US10730870, Example 1
CC(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2scnc2Br)cc1)N1Cc2ccccc2C1=O
C28H29BrN4O4S
597.535000
YOOOVOZMQBEBAA-PUHATCMVSA-N P40337, P62877, Q13617 Cullin-2, von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM454838; PubChem:CID122529103
Local ready
Direct docking supported
E3L019334
BDB019334
US10730870, Example 2
CC(C)[C@@H](C(=O)N1C[C@H](O)C[C@H]1C(=O)NCc1ccc(-c2scnc2C2CC2)cc1)N1Cc2ccccc2C1=O
C31H34N4O4S
558.704000
DZMNNNDNOJMJII-NIYJGHKDSA-N P40337, P62877, Q13617 Cullin-2, von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM454839; PubChem:CID122529127
Local ready
Direct docking supported
E3L019335
BDB019335
US10730870, Example 4
C=Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@H](C(C)C)N2Cc3ccccc3C2=O)cc1
C30H32N4O4S
544.677000
KHBWOVOVFAUUIY-RZFJZAQRSA-N P40337, P62877, Q13617 Cullin-2, von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM454841; PubChem:CID122529197
Local ready
Direct docking supported
E3L019336
BDB019336
US10730870, Example 5
CCc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@H](C(C)C)N2Cc3ccccc3C2=O)cc1
C30H34N4O4S
546.693000
JYRWFOMSBQFKQQ-RZFJZAQRSA-N P40337, P62877, Q13617 Cullin-2, von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM454842; PubChem:CID122529057
Local ready
Direct docking supported
E3L019337
BDB019337
US10730870, Example 7
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@H](C(C)C)N2Cc3cccc(Cl)c3C2=O)cc1
C29H31ClN4O4S
567.111000
SKJXLOZLRPLTTK-VTZPFEBOSA-N P40337, P62877, Q13617 Cullin-2, von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM454844; PubChem:CID122529031
Local ready
Direct docking supported
E3L019338
BDB019338
US10730870, Example 8
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@H](C(C)C)N2Cc3cccc(F)c3C2=O)cc1
C29H31FN4O4S
550.656000
HWJIMIISFDRVKH-VTZPFEBOSA-N P40337, P62877, Q13617 Cullin-2, von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM454845; PubChem:CID122529080
Local ready
Direct docking supported
E3L019339
BDB019339
US10730870, Example 9
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@H](C(C)C)N2Cc3ccc(F)cc3C2=O)cc1
C29H31FN4O4S
550.656000
FXTPIOUOHHWSGG-VJTSUQJLSA-N P40337, P62877, Q13617 Cullin-2, von Hippel-Lindau disease tumor suppressor
BindingDB, PubChem
BindingDB:BDBM454846; PubChem:CID122528957
Local ready
Direct docking supported
E3L019340
BDB019340
US10730870, Example 10
Cc1ncsc1-c1ccc(CNC(=O)[C@@H]2C[C@@H](O)CN2C(=O)[C@@H](C(C)C)N2Cc3ccc(F)cc3C2=O)cc1
C29H31FN4O4S
550.656000
FXTPIOUOHHWSGG-PZUNEJSGSA-N P40337, P62877, Q13617 von Hippel-Lindau disease tumor suppressor, Cullin-2
BindingDB, PubChem
BindingDB:BDBM454847; PubChem:CID122529128
Local ready
Direct docking supported