E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023501
BDB023501
US11236047, Example 292
CC(=O)N1CCC(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(C#N)cn2)[C@@]3(OCC2(CO)CC2)c2ccc(Cl)cc2)CC1
C35H36ClFN4O5
647.147000
ILWWWJCABRTVHO-PWXSHKNQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535342; PubChem:CID135282777
Local ready
Direct docking supported
E3L023502
BDB023502
US11236047, Example 171
C[S+]([O-])C1(CO[C@]2(c3ccc(Cl)cc3)c3c(F)cc(C(C)(C)O)cc3C(=O)N2Cc2ccc(Cl)cn2)CC1
C28H27Cl2FN2O4S
577.505000
BMDCWINLUAOPGG-GOGSRFGOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535343; PubChem:CID135282711
Local ready
Direct docking supported
E3L023503
BDB023503
US11236047, Example 269
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)CN3CCC3)cc2C(=O)N1Cc1ccc(Cl)cn1
C27H27Cl2N3O3
512.437000
OZCYVNAYNKYZPN-SSYAZFEXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535345; PubChem:CID135282142
Local ready
Direct docking supported
E3L023504
BDB023504
US11236047, Example 168
C[C@H](CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(C)O)cc2C(=O)N1Cc1ccc(Cl)cn1)C(N)=O
C27H26Cl2FN3O4
546.426000
BQIHMGXSJXBAHX-YVORESIASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535347; PubChem:CID135282694
Local ready
Direct docking supported
E3L023505
BDB023505
US11236047, Example 175
Cn1cc(C(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCC2(C(N)=O)CC2)c2ccc(Cl)cc2)cn1
C30H26Cl2FN5O4
610.473000
PHAFDTKHQROBDP-NPRFROTHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535348; PubChem:CID135282380
Local ready
Direct docking supported
E3L023506
BDB023506
US11236047, Example 271
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)CN3CCN(C)[C@@H](C)C3)cc2C(=O)N1Cc1ccc(Cl)cn1
C30H34Cl2N4O3
569.533000
XDGXLCFSFAEFAF-BUVZGADESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535350; PubChem:CID135282731
Local ready
Direct docking supported
E3L023507
BDB023507
US11236047, Example 274
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)CN3CCN(C)C[C@@H]3C)cc2C(=O)N1Cc1ccc(Cl)cn1
C30H34Cl2N4O3
569.533000
OAXQKVNYPRRULT-BUVZGADESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535351; PubChem:CID135282887
Local ready
Direct docking supported
E3L023508
BDB023508
US11236047, Example 309
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C#N)cn1)[C@@]2(OCC1(CO)CC1)c1ccc(Cl)cc1)c1ccccn1
C33H28ClFN4O4
599.062000
GBXYQVTUXFUTDE-NFCCVXSLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535352; PubChem:CID135282651
Local ready
Direct docking supported
E3L023509
BDB023509
US11236047, Example 272
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)CN3CCN(C)[C@H](C)C3)cc2C(=O)N1Cc1ccc(Cl)cn1
C30H34Cl2N4O3
569.533000
XDGXLCFSFAEFAF-DVVOHRMSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535353; PubChem:CID135282222
Local ready
Direct docking supported
E3L023510
BDB023510
US11236047, Example 178
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCC2(C(N)=O)CC2)c2ccc(Cl)cc2)cn1
C31H28Cl2FN5O4
624.500000
XMACNOJSFYZIIC-ZGVDRVBQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535354; PubChem:CID135282386
Local ready
Direct docking supported
E3L023511
BDB023511
US11236047, Example 145
CNC(=O)C(C)(O)c1ccc2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(OC)c1ccc(Cl)cc1
C25H23Cl2N3O4
500.382000
WHDQNEDIIFHEHU-WUBHUQEYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535355; PubChem:CID135282706
Local ready
Direct docking supported
E3L023512
BDB023512
US11236047, Example 173
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(C)O)cc2C(=O)N1Cc1ccc(C#N)cn1
C25H21ClFN3O3
465.912000
ZMIMOAHXTNUTOH-RUZDIDTESA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535356; PubChem:CID135283060
Local ready
Direct docking supported
E3L023513
BDB023513
US11236047, Example 148
CCNC(=O)C(C)(O)c1ccc2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(OC)c1ccc(Cl)cc1
C26H25Cl2N3O4
514.409000
KYLDDLUOIYASLH-FXDYGKIASA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535358; PubChem:CID135282453
Local ready
Direct docking supported
E3L023514
BDB023514
US11236047, Example 153
CC(O)C1(CO[C@]2(c3ccc(Cl)cc3)c3c(F)cc(C(C)(C)O)cc3C(=O)N2Cc2ccc(C#N)cn2)CC1
C30H29ClFN3O4
550.030000
DUDAOHFBLXUQBQ-ZGPRTBGDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535359; PubChem:CID135282549
Local ready
Direct docking supported
E3L023515
BDB023515
US11236047, Example 287
CN1CCC(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(C#N)cn2)[C@@]3(OCC2(CO)CC2)c2ccc(Cl)cc2)CC1
C34H36ClFN4O4
619.137000
FDQSEIVSQMEFMB-SZFCLFMZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535361; PubChem:CID135282603
Local ready
Direct docking supported
E3L023516
BDB023516
US11236047, Example 152
CO[C@]1(c2ccc(Cl)cc2)c2ccc(C(C)(O)C(=O)NC(C)C)cc2C(=O)N1Cc1ccc(Cl)cn1
C27H27Cl2N3O4
528.436000
SQIISUGGYDTKSQ-SSYAZFEXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535362; PubChem:CID135282152
Local ready
Direct docking supported
E3L023517
BDB023517
US11236047, Example 345
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCC2(CO)CC2)c2ccc(Cl)cc2)cn1
C31H29Cl2FN4O4
611.501000
PTBQGDBOHCKVRI-ZGVDRVBQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535363; PubChem:CID135282087
Local ready
Direct docking supported
E3L023518
BDB023518
US11236047, Example 280
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C#N)cn1)[C@@]2(OCC1(C(N)=O)CC1)c1ccc(Cl)cc1)C1CCOCC1
C33H32ClFN4O5
619.093000
JEXOJDCVYWEBKG-NFCCVXSLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535365; PubChem:CID135282624
Local ready
Direct docking supported
E3L023519
BDB023519
US11236047, Example 131
CCC(O)(c1cc(F)c2c(c1)C(=O)N([C@@H](CC(=O)O)c1ccc(Cl)cc1)C2(OC)c1ccc(Cl)cc1)C1(F)CCN(C)CC1
C33H34Cl2F2N2O5
647.546000
UASWWYBCWGDNKX-BECFNDGMSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535366; PubChem:CID135281559
Local ready
Direct docking supported
E3L023520
BDB023520
US11236047, Example 284
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ncc(Cl)cn1)[C@@]2(OCC1(C(N)=O)CC1)c1ccc(Cl)cc1)C1CCOCC1
C31H31Cl2FN4O5
629.516000
CHZQZTPQTRTMGE-ZGVDRVBQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535368; PubChem:CID135282373
Local ready
Direct docking supported