E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L023541
BDB023541
US11236047, Example 211
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(C#N)cn2)[C@@]3(OCC2(C#N)CC2)c2ccc(Cl)cc2)cn1
C32H26ClFN6O3
597.050000
RKSMIALTWWALNY-BDJZEIKTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535396; PubChem:CID135283189
Local ready
Direct docking supported
E3L023542
BDB023542
US11236047, Example 201
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCC2(C#N)CC2)c2ccc(Cl)cc2)cn1
C31H26Cl2FN5O3
606.485000
VDKMMDFDHKJNRA-ZGVDRVBQSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535397; PubChem:CID135282589
Local ready
Direct docking supported
E3L023543
BDB023543
US11236047, Example 193
CC(O)(c1cc(F)c2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(OCC1(C(N)=O)CC1)c1ccc(Cl)cc1)c1cscn1
C30H25Cl2FN4O4S
627.525000
AOSVVLGOJNFRNH-FUJFQHJFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535398; PubChem:CID135282546
Local ready
Direct docking supported
E3L023544
BDB023544
US11236047, Example 144
CC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(OCC1(COCC(=O)O)CC1)c1ccc(Cl)cc1
C30H29Cl2FN2O6
603.474000
GOUTYWNJSCUIGZ-SSEXGKCCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535400; PubChem:CID135282264
Local ready
Direct docking supported
E3L023545
BDB023545
US11236047, Example 180
CCn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCC2(C(N)=O)CC2)c2ccc(Cl)cc2)cn1
C32H30Cl2FN5O4
638.527000
DCAVGHLCTQJYEH-BDJZEIKTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535401; PubChem:CID135282574
Local ready
Direct docking supported
E3L023546
BDB023546
US11236047, Example 295
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)C3CCN(C(=O)c4ncco4)CC3)cc2C(=O)N1Cc1ccc(Cl)cn1
C32H29Cl2FN4O5
639.511000
RQDLJZPOABRDMA-IADGFXSZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535402; PubChem:CID135282892
Local ready
Direct docking supported
E3L023547
BDB023547
US11236047, Example 138
CN(C)CC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1
C29H30Cl2FN3O4
574.480000
DEHGDPBWKNEFGA-SJAHEGMPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535403; PubChem:CID135282489
Local ready
Direct docking supported
E3L023548
BDB023548
US11236047, Example 156
CC(=O)NCC1(CO[C@]2(c3ccc(Cl)cc3)c3c(F)cc(C(C)(C)O)cc3C(=O)N2Cc2ccc(Cl)cn2)CC1
C30H30Cl2FN3O4
586.491000
OSEHZDAAYCTXDQ-SSEXGKCCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535404; PubChem:CID135282082
Local ready
Direct docking supported
E3L023549
BDB023549
US11236047, Example 213
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCCO)c2ccc(Cl)cc2)cn1
C28H25Cl2FN4O4
571.436000
JICFZAOJKDDMCA-PLYLYKGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535405; PubChem:CID135282855
Local ready
Direct docking supported
E3L023550
BDB023550
US11236047, Example 203
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ncc(Cl)cn2)[C@@]3(OCC2(O)CC2)c2ccc(Cl)cc2)cn1
C29H26Cl2FN5O4
598.462000
MYMTUGSPJYJBAG-ZBAATNBSSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535406; PubChem:CID137497991
Local ready
Direct docking supported
E3L023551
BDB023551
US11236047, Example 214
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ncc(Cl)cn2)[C@@]3(OCC2(C(N)=O)CC2)c2ccc(Cl)cc2)cn1
C30H27Cl2FN6O4
625.488000
YQQJPSAALPSLDT-FUJFQHJFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535408; PubChem:CID135282191
Local ready
Direct docking supported
E3L023552
BDB023552
US11236047, Example 311
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)C3CCS(=O)(=O)CC3)cc2C(=O)N1Cc1ccc(Cl)cn1
C28H27Cl2FN2O5S
593.504000
ULHDHSTWWOIQJU-PLYLYKGUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535409; PubChem:CID137498011
Local ready
Direct docking supported
E3L023553
BDB023553
US11236047, Example 216
COc1ccc(CN2C(=O)c3cc(C(C)(O)c4cnn(C)c4)cc(F)c3[C@]2(OCC2(C(N)=O)CC2)c2ccc(Cl)cc2)cn1
C32H31ClFN5O5
620.081000
QAJDMQMVZQWDGC-BDJZEIKTSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535410; PubChem:CID135282578
Local ready
Direct docking supported
E3L023554
BDB023554
US11236047, Example 182
CO[C@]1(c2ccc(Cl)cc2)c2c(F)cc(C(C)(O)c3cnn(C4CN(C(C)=O)C4)c3)cc2C(=O)N1Cc1ccc(Cl)cn1
C31H28Cl2FN5O4
624.500000
LHIMDIZJOXHQDM-NLIBRCFJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535411; PubChem:CID135282528
Local ready
Direct docking supported
E3L023555
BDB023555
US11236047, Example 140
CCOCC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1
C29H29Cl2FN2O5
575.464000
LWOJSHCDLMMOQI-SJAHEGMPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535412; PubChem:CID135282474
Local ready
Direct docking supported
E3L023556
BDB023556
US11236047, Example 142
COCC(C)(O)c1cc(F)c2c(c1)C(=O)N(Cc1ccc(Cl)cn1)[C@@]2(O[C@H]1CCOC1)c1ccc(Cl)cc1
C28H27Cl2FN2O5
561.437000
JTWNLIFKVVQASM-ITLXXOFFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535414; PubChem:CID163407647
Local ready
Direct docking supported
E3L023557
BDB023557
US11236047, Example 276
CC(O)(CN1CCCC1)c1cc(F)c2c(c1)C(=O)N(Cc1ccc(C#N)cn1)[C@@]2(OCC1(C#N)CC1)c1ccc(Cl)cc1
C33H31ClFN5O3
600.094000
NAJXOWIJGLQLBB-NFCCVXSLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535416; PubChem:CID135282580
Local ready
Direct docking supported
E3L023558
BDB023558
US11236047, Example 278
CN1CCN(CC(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(C#N)cn2)[C@@]3(OCC2(C#N)CC2)c2ccc(Cl)cc2)CC1
C34H34ClFN6O3
629.136000
OFUBYOJVTHCLBN-SZFCLFMZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535418; PubChem:CID135283159
Local ready
Direct docking supported
E3L023559
BDB023559
US11236047, Example 195
Cn1cnc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(Cl)cn2)[C@@]3(OCC2(O)CC2)c2ccc(Cl)cc2)c1
C30H27Cl2FN4O4
597.474000
FMSSWQMNRMVPPP-FUJFQHJFSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535420; PubChem:CID135282939
Local ready
Direct docking supported
E3L023560
BDB023560
US11236047, Example 218
Cn1cc(C(C)(O)c2cc(F)c3c(c2)C(=O)N(Cc2ccc(C#N)cn2)[C@@]3(O[C@H]2CCOC2)c2ccc(Cl)cc2)cn1
C31H27ClFN5O4
588.039000
IMGHGKVWJOGDFL-OERQIQHUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM535421; PubChem:CID135282568
Local ready
Direct docking supported