E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025721
BDB025721
US11319299, Example 107
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)cc2)C[C@H](C)N1C
C28H32F2N6O2
522.600000
RPYOPIZSDSNFQO-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553057; PubChem:CID137376932
Local ready
Direct docking supported
E3L025722
BDB025722
BDBM553058
C[C@@H]1CN(c2cc(F)c(-c3cc(F)cc(N4CCOCC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H32F5N5O3
605.608000
QYCRNKWLIAOHLR-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553058; PubChem:CID137377137
Local ready
Direct docking supported
E3L025723
BDB025723
US11319299, Example 109
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccccc2Cl)C[C@H](C)N1C
C28H32ClFN6O2
539.055000
SFNOCEQUUVRJGE-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553059; PubChem:CID137376811
Local ready
Direct docking supported
E3L025724
BDB025724
US11319299, Example 110
COc1cccc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)c1F
C29H34F2N6O3
552.626000
OVOXAOOAEWEYMJ-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553060; PubChem:CID137377604
Local ready
Direct docking supported
E3L025725
BDB025725
US11319299, Example 111
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)c(F)c2)C[C@H](C)N1C
C28H31F3N6O2
540.590000
ODUGGTLVMXHSCS-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553061; PubChem:CID138541593
Local ready
Direct docking supported
E3L025726
BDB025726
BDBM553062
COc1ccc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cc1
C27H28F4N4O3
532.538000
YZHQPPVVRCDJPS-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553062; PubChem:CID137377134
Local ready
Direct docking supported
E3L025727
BDB025727
BDBM553063
C[C@@H]1CN(c2cc(F)c(-c3ccc(OCC4CC4)cc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H32F4N4O3
572.603000
KHZBHVAPKVGNLZ-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553063; PubChem:CID137377027
Local ready
Direct docking supported
E3L025728
BDB025728
BDBM553064
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCCC4)cc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H33F4N5O2
571.619000
NOFXQNWIUVPHGQ-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553064; PubChem:CID137377073
Local ready
Direct docking supported
E3L025729
BDB025729
US11319299, Example 115
CC(=O)Nc1cccc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)c1
C30H36FN7O3
561.662000
KQPFDVCEDGWLHG-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553066; PubChem:CID138541766
Local ready
Direct docking supported
E3L025730
BDB025730
US11319299, Example 116
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2nn(C)c3ccccc23)CCN1C
C29H33FN8O2
544.635000
AWVUBEKBYVCYAU-IBGZPJMESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553067; PubChem:CID138551369
Local ready
Direct docking supported
E3L025731
BDB025731
US11319299, Example 117
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)cc3)cc2NC(=O)c2nn(C)c3ccccc23)CCN1C
C31H35FN6O2
542.659000
OTTVJSRLQRMGRM-NRFANRHFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553068; PubChem:CID138551372
Local ready
Direct docking supported
E3L025732
BDB025732
BDBM553069
C[C@@H]1CN(c2cc(F)c(-c3cccc(CN(C)C4COC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H35F4N5O3
601.645000
HAMZUFIOXPDBKJ-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553069; PubChem:CID137376883
Local ready
Direct docking supported
E3L025733
BDB025733
BDBM553070
C[C@@H]1CN(c2cc(F)c(-c3cccc(CN4CCC(F)CC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C32H36F5N5O2
617.663000
ANPIELHXHXRUKD-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553070; PubChem:CID137376886
Local ready
Direct docking supported
E3L025734
BDB025734
BDBM553071
O=C(Nc1cc(-c2cnc(N3CCOCC3)nc2)c(F)cc1N1CCN2CCOCC2C1)c1c[nH]c(=O)cc1C(F)(F)F
C28H29F4N7O4
603.577000
DLDABIZUNYEMEK-UHFFFAOYSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553071
Local ready
Direct docking supported
E3L025735
BDB025735
US11319299, Example 121
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cnn(C)c2)CCN1C
C25H31FN8O2
494.575000
FCMGRGPJJVKGQL-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553072; PubChem:CID138551414
Local ready
Direct docking supported
E3L025736
BDB025736
US11319299, Example 122
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)cc3)cc2NC(=O)c2cnn(C)c2)CCN1C
C27H33FN6O2
492.599000
YIPFNRRSQBRXIB-IBGZPJMESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553073; PubChem:CID138551366
Local ready
Direct docking supported
E3L025737
BDB025737
BDBM553074
C[C@@H]1CN(c2cc(F)c(-c3cnc(O)c(C#N)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H24F4N6O3
544.509000
HEFCIVPEMLLICE-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553074; PubChem:CID137377260
Local ready
Direct docking supported
E3L025738
BDB025738
BDBM553075
C[C@@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)c(F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H32F5N5O3
605.608000
JBMOHOCNFAFVPY-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553075; PubChem:CID138541952
Local ready
Direct docking supported
E3L025739
BDB025739
BDBM553076
C[C@@H]1CN(c2cc(F)c(-c3cccc(OCC4CC4)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H32F4N4O3
572.603000
UINCQSCQOHTTJM-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553076; PubChem:CID137376949
Local ready
Direct docking supported
E3L025740
BDB025740
US11319299, Example 126
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cccc(N(C)C)c2)C[C@H](C)N1C
C30H38FN7O2
547.679000
VREFXFONEXZPNJ-OYRHEFFESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553077; PubChem:CID138541794
Local ready
Direct docking supported