E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025701
BDB025701
US11319299, Example 87
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccc(F)cc2Cl)C[C@H](C)N1C
C28H31ClF2N6O2
557.045000
OHHYLCGVVMQZEM-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553037; PubChem:CID138541641
Local ready
Direct docking supported
E3L025702
BDB025702
US11319299, Example 88
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(F)ccc2C(F)(F)F)C[C@H](C)N1C
C29H31F5N6O2
590.597000
BEDPKUFFMNDEMS-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553038; PubChem:CID137376898
Local ready
Direct docking supported
E3L025703
BDB025703
US11319299, Example 89
COc1cccc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)c1
C29H35FN6O3
534.636000
OOLSQXVQUZSLSY-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553039; PubChem:CID137377064
Local ready
Direct docking supported
E3L025704
BDB025704
BDBM553040
COCCOc1ccc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cc1
C29H32F4N4O4
576.591000
LJEZKJONINXQKR-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553040; PubChem:CID137377108
Local ready
Direct docking supported
E3L025705
BDB025705
BDBM553041
CC(C)COc1ncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cc1Cl
C29H32ClF4N5O3
610.052000
JJPSHYJTNCXTLD-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553041; PubChem:CID137376852
Local ready
Direct docking supported
E3L025706
BDB025706
BDBM553042
C[C@@H]1CN(c2cc(F)c(-c3ccc(OCC4CC4)c(Cl)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H31ClF4N4O3
607.048000
VUTVWOZKULFNRC-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553042; PubChem:CID137377178
Local ready
Direct docking supported
E3L025707
BDB025707
US11319299, Example 93
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C29H33F4N7O3
603.621000
NNAMONHIEIUUHG-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553043; PubChem:CID137376930
Local ready
Direct docking supported
E3L025708
BDB025708
BDBM553044
C[C@@H]1CN(c2cc(F)c(C3=CCOCC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C25H28F4N4O3
508.516000
RRCYZJTZHOHODI-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553044; PubChem:CID137377118
Local ready
Direct docking supported
E3L025709
BDB025709
BDBM553045
C[C@@H]1CN(c2cc(F)c(C3=CCNCC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C25H29F4N5O2
507.532000
AVGVTXDSLOVNKU-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553045; PubChem:CID137377198
Local ready
Direct docking supported
E3L025710
BDB025710
US11319299, Example 96
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]nc2C(F)(F)F)CCN1C
C25H28F4N8O2
548.545000
RBCIHUVQKPTWLN-HNNXBMFYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553046; PubChem:CID138551433
Local ready
Direct docking supported
E3L025711
BDB025711
US11319299, Example 97
Cc1cc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2CCN(C)[C@@H](C)C2)cc(C)c1F
C29H34F2N6O2
536.627000
QTPUIDDNZCGPCD-FQEVSTJZSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553047; PubChem:CID138551314
Local ready
Direct docking supported
E3L025712
BDB025712
BDBM553048
C[C@@H]1CN(c2cc(F)c(-c3cc(Cl)c(O)c(C#N)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H24ClF4N5O3
577.966000
ZNUVRQIZJMPPNN-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553048; PubChem:CID137376983
Local ready
Direct docking supported
E3L025713
BDB025713
BDBM553049
C[C@@H]1CN(c2cc(F)c(-c3cnc(OCc4ccccc4)c(C#N)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C33H30F4N6O3
634.634000
JHWNBLRQSVZFFV-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553049; PubChem:CID137377132
Local ready
Direct docking supported
E3L025714
BDB025714
BDBM553050
C[C@@H]1CN(c2cc(F)c(-c3ccc(C#N)cc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H25F4N5O2
527.522000
IPEMJWWKLFCDAQ-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553050; PubChem:CID137377145
Local ready
Direct docking supported
E3L025715
BDB025715
BDBM553051
C[C@@H]1CN(c2cc(F)c(-c3ccc(OC4CCOCC4)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H33F4N5O4
603.617000
XNFQQDCHXNKZAL-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553051; PubChem:CID137376822
Local ready
Direct docking supported
E3L025716
BDB025716
BDBM553052
C[C@@H]1CN(c2cc(F)c(-c3cccc(C#N)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H25F4N5O2
527.522000
GQMOUZIVWHCVSC-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553052; PubChem:CID137377063
Local ready
Direct docking supported
E3L025717
BDB025717
BDBM553053
C[C@@H]1CN(c2cc(F)c(-c3cnc(N(C)C)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H29F4N7O2
547.557000
YSPYPNXBAMLRAS-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553053; PubChem:CID137377211
Local ready
Direct docking supported
E3L025718
BDB025718
BDBM553054
COc1cc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cnc1OC
C27H29F4N5O4
563.552000
JYHUDMVMJYPMOG-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553054; PubChem:CID137377667
Local ready
Direct docking supported
E3L025719
BDB025719
US11319299, Example 105
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cccc3c2OCO3)C[C@H](C)N1C
C29H33FN6O4
548.619000
FAJAAYYRXGYELC-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553055; PubChem:CID138541651
Local ready
Direct docking supported
E3L025720
BDB025720
US11319299, Example 106
COc1ccc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)cc1
C29H35FN6O3
534.636000
NSSDRFOXNAVQTL-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553056; PubChem:CID138541931
Local ready
Direct docking supported