E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025741
BDB025741
US11319299, Example 127
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cocn2)C[C@H](C)N1C
C25H30FN7O3
495.559000
HFFYDYCECLNSNX-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553078; PubChem:CID137377222
Local ready
Direct docking supported
E3L025742
BDB025742
US11319299, Example 128
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)CCN1C
C28H31F4N7O3
589.594000
CGLBRJYXTDVSFE-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553079; PubChem:CID138551373
Local ready
Direct docking supported
E3L025743
BDB025743
US11319299, Example 129
C[C@H]1CN(c2cc(F)c(-c3ccc(N4CCOCC4)cc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)CCN1C
C30H33F4N5O3
587.618000
LVEWQKTYQLEZCT-IBGZPJMESA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553080; PubChem:CID138551547
Local ready
Direct docking supported
E3L025744
BDB025744
BDBM553081
CC(C)Oc1ncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cn1
C27H30F4N6O3
562.568000
LFWNRTJRNQVEII-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553081; PubChem:CID137376833
Local ready
Direct docking supported
E3L025745
BDB025745
BDBM553082
C[C@@H]1CN(c2cc(F)c(-c3ccc(C#N)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H24F4N6O2
528.510000
SEEKFFUITFCRQH-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553082; PubChem:CID137376757
Local ready
Direct docking supported
E3L025746
BDB025746
BDBM553083
Cc1cc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cnc1C#N
C27H26F4N6O2
542.537000
RRSUQQSUANYHKY-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553083; PubChem:CID137377326
Local ready
Direct docking supported
E3L025747
BDB025747
BDBM553084
C[C@@H]1CN(c2cc(F)c(-c3ccnc(C#N)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H24F4N6O2
528.510000
GQCHSYCFIHPLDK-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553084; PubChem:CID137377179
Local ready
Direct docking supported
E3L025748
BDB025748
BDBM553085
COc1cc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cc(C(F)(F)F)n1
C27H26F7N5O3
601.523000
UTELYVMRSRHBSI-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553085; PubChem:CID137377058
Local ready
Direct docking supported
E3L025749
BDB025749
BDBM553086
COc1cc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cc(C)n1
C27H29F4N5O3
547.553000
COZOMKUOIMRNRY-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553086; PubChem:CID138541614
Local ready
Direct docking supported
E3L025750
BDB025750
BDBM553087
COc1ncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cc1C(F)(F)F
C27H26F7N5O3
601.523000
MHVHCARMTZFJNS-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553087; PubChem:CID137376889
Local ready
Direct docking supported
E3L025751
BDB025751
US11319299, Example 137
COc1cc(C#N)c(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2C[C@@H](C)N(C)[C@@H](C)C2)cn1
C29H33FN8O3
560.634000
VDIMFVDCAXCMDQ-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553088; PubChem:CID137377130
Local ready
Direct docking supported
E3L025752
BDB025752
US11319299, Example 138
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cccc(Cl)c2)C[C@H](C)N1C
C28H32ClFN6O2
539.055000
OLDYACLPQYPFEF-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553089; PubChem:CID137376760
Local ready
Direct docking supported
E3L025753
BDB025753
US11319299, Example 139
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c(Cl)cccc2Cl)C[C@H](C)N1C
C28H31Cl2FN6O2
573.500000
JADSUCOKLXUVPD-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553090; PubChem:CID137377485
Local ready
Direct docking supported
E3L025754
BDB025754
US11319299, Example 140
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cccc(Cl)c2F)C[C@H](C)N1C
C28H31ClF2N6O2
557.045000
WNJWEGPRXFMJHB-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553091; PubChem:CID138541777
Local ready
Direct docking supported
E3L025755
BDB025755
US11319299, Example 141
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2ccccc2C(F)(F)F)C[C@H](C)N1C
C29H32F4N6O2
572.607000
MGPGDGUJGAWPOJ-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553092; PubChem:CID137376854
Local ready
Direct docking supported
E3L025756
BDB025756
BDBM553093
C[C@@H]1CN(c2cc(F)c(-c3ccc(N(C)C)nc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H30F4N6O2
546.569000
PAAABWUXJNOVQU-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553093; PubChem:CID137377009
Local ready
Direct docking supported
E3L025757
BDB025757
BDBM553094
C[C@@H]1CN(c2cc(F)c(C3=CCN(C(=O)OC(C)(C)C)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H37F4N5O4
607.649000
GDQZOYRZDSAZHR-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553094
Local ready
Direct docking supported
E3L025758
BDB025758
BDBM553095
C[C@@H]1CN(c2cc(F)c(-c3ccc(C(F)(F)F)cc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H25F7N4O2
570.509000
NTXCRTGFUNSPSU-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553095; PubChem:CID137376914
Local ready
Direct docking supported
E3L025759
BDB025759
BDBM553096
C[C@@H]1CN(c2cc(F)c(-c3ccc(OC(F)(F)F)cc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H25F7N4O3
586.508000
YWOJOPOTDSDSBS-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553096; PubChem:CID138542060
Local ready
Direct docking supported
E3L025760
BDB025760
BDBM553097
C[C@@H]1CN(c2cc(F)c(-c3ccccc3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H26F4N4O2
502.512000
AYPHWUBEQOUBEY-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553097; PubChem:CID137376967
Local ready
Direct docking supported