E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L025781
BDB025781
BDBM553118
C[C@@H]1CN(c2cc(F)c(C3=CCN(CC4CCOCC4)CC3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C31H39F4N5O3
605.677000
RUYXOZUXCSJUMA-BGYRXZFFSA-N P61964 WD repeat-containing protein 5
BindingDB
BindingDB:BDBM553118
Local ready
Direct docking supported
E3L025782
BDB025782
US11319299, Example 168
CN(C)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(Cl)cc(Cl)c2)C1
C27H29Cl2FN6O2
559.473000
NSHJMTHDTWJICB-OAQYLSRUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553119; PubChem:CID137376768
Local ready
Direct docking supported
E3L025783
BDB025783
US11319299, Example 169
CN(C)[C@@H]1CCN(c2cc(F)c(-c3ccc(N4CCOCC4)cc3)cc2NC(=O)c2cc(Cl)cc(Cl)c2)C1
C29H31Cl2FN4O2
557.497000
AXJMRSMXXRBOOZ-XMMPIXPASA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553120; PubChem:CID137376862
Local ready
Direct docking supported
E3L025784
BDB025784
BDBM553121
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)c(C#N)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H31F4N7O3
613.616000
YJMWNABJAQIGQE-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553121; PubChem:CID137376925
Local ready
Direct docking supported
E3L025785
BDB025785
BDBM553122
Cc1cc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)cnc1N1CCOCC1
C30H34F4N6O3
602.633000
JXKRYEHVTMEBHM-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553122; PubChem:CID138541718
Local ready
Direct docking supported
E3L025786
BDB025786
BDBM553123
C[C@@H]1CN(c2cc(F)c(-c3cnc4c(c3)CCN4)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H28F4N6O2
544.553000
QVJJFNZMEHQACK-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553123; PubChem:CID137376917
Local ready
Direct docking supported
E3L025787
BDB025787
BDBM553124
C[C@@H]1CN(c2cc(F)c(-c3cncc(C(F)(F)F)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H24F7N5O2
571.497000
CMWKGAPMGDOMBH-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553124; PubChem:CID138541820
Local ready
Direct docking supported
E3L025788
BDB025788
BDBM553125
C[C@@H]1CN(c2cc(F)c(-c3cncc(C(=O)NC(C)(C)C)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C30H34F4N6O3
602.633000
OUEHUBUDKMGRLB-CALCHBBNSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553125; PubChem:CID137376960
Local ready
Direct docking supported
E3L025789
BDB025789
US11319299, Example 175
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(Cl)cc(C(F)(F)F)c2)C[C@H](C)N1C
C29H31ClF4N6O2
607.052000
VXEIFCUMDIIQDX-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553126; PubChem:CID137376973
Local ready
Direct docking supported
E3L025790
BDB025790
US11319299, Example 176
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cc(F)cc(C(F)(F)F)c2)C[C@H](C)N1C
C29H31F5N6O2
590.597000
LZRCBEUAJJZLNT-HDICACEKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553127; PubChem:CID137376943
Local ready
Direct docking supported
E3L025791
BDB025791
US11319299, Example 177
CN(C)[C@@H]1CCN(c2cc(F)c(-c3ccc(N4CCOCC4)cc3)cc2NC(=O)c2cn[nH]c2)C1
C26H31FN6O2
478.572000
JXVIFSMGTNIOGH-OAQYLSRUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553128; PubChem:CID137377510
Local ready
Direct docking supported
E3L025792
BDB025792
BDBM553129
Cc1cncc(-c2cc(NC(=O)c3c[nH]c(=O)cc3C(F)(F)F)c(N3C[C@@H](C)N(C)[C@@H](C)C3)cc2F)c1
C26H27F4N5O2
517.527000
ZZNCGOBAQRWJLH-IYBDPMFKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553129; PubChem:CID137376809
Local ready
Direct docking supported
E3L025793
BDB025793
BDBM553130
C[C@@H]1CN(c2cc(F)c(-c3cncc(C(N)=O)c3)cc2NC(=O)c2c[nH]c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C26H26F4N6O3
546.525000
SXBPUWVYUJNADA-OKILXGFUSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553130; PubChem:CID137377180
Local ready
Direct docking supported
E3L025794
BDB025794
US11319299, Example 180
C[C@@H]1CN(c2cc(F)c(-c3cncc(C(F)(F)F)c3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C[C@H](C)N1C
C27H26F7N5O2
585.524000
NZDCGPATBOYWEA-GASCZTMLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553131; PubChem:CID138541817
Local ready
Direct docking supported
E3L025795
BDB025795
US11319299, Example 181
Cc1csc(C(=O)Nc2cc(-c3cnc(N4CCOCC4)nc3)c(F)cc2N2CCN(C)[C@@H](C)C2)n1
C25H30FN7O2S
511.627000
GKEHOVGMOLDKIT-KRWDZBQOSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553132; PubChem:CID138551529
Local ready
Direct docking supported
E3L025796
BDB025796
US11319299, Example 182
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2csc(CN(C)C)n2)CCN1C
C27H35FN8O2S
554.696000
WZTJEHAHJNDWAR-SFHVURJKSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553133; PubChem:CID138551382
Local ready
Direct docking supported
E3L025797
BDB025797
US11319299, Example 183
C[C@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2n[nH]cc2Cl)CCN1C
C24H28ClFN8O2
514.993000
LCEDTDOQNZFGOP-HNNXBMFYSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553134; PubChem:CID138551302
Local ready
Direct docking supported
E3L025798
BDB025798
US11319299, Example 184
CN(C)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cn(C)c(=O)cc2C(F)(F)F)C1
C28H31F4N7O3
589.594000
OZQJEGFKGIVCCF-GOSISDBHSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553135; PubChem:CID138541731
Local ready
Direct docking supported
E3L025799
BDB025799
US11319299, Example 185
CN(C)[C@@H]1CCN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2c[nH]nc2C(F)(F)F)C1
C25H28F4N8O2
548.545000
ZXJKKAHDLPKFFA-MRXNPFEDSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553136; PubChem:CID138541771
Local ready
Direct docking supported
E3L025800
BDB025800
US11319299, Example 186
C[C@@H]1CN(c2cc(F)c(-c3cnc(N4CCOCC4)nc3)cc2NC(=O)c2cccc(C(F)(F)F)c2)C[C@H](C)N1C
C29H32F4N6O2
572.607000
XNGURGUFKUEZJJ-KDURUIRLSA-N P61964 WD repeat-containing protein 5
BindingDB, PubChem
BindingDB:BDBM553137; PubChem:CID137376904
Local ready
Direct docking supported