E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L009961
BDB009961
BDBM218191
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1C
C27H26F3N5O2
509.532000
QIIWMJZOLWTVDS-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218191; PubChem:CID90324954
Local ready
Direct docking supported
E3L009962
BDB009962
BDBM218192
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc4ccccc4c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C29H24F3N5O2
531.538000
VGWUPBXKWTZOSE-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218192; PubChem:CID90324957
Local ready
Direct docking supported
E3L009963
BDB009963
BDBM218194
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc(F)c(Cl)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H22ClF4N5O2
547.940000
OVUAPQVGAUZHPY-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218194; PubChem:CID90317930
Local ready
Direct docking supported
E3L009964
BDB009964
BDBM218197
Cc1cccc(C)c1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CC3)c2n1Cc1ccc(C(F)(F)F)cc1
C27H26F3N5O2
509.532000
DYNITNWINGFQFP-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218197; PubChem:CID90324953
Local ready
Direct docking supported
E3L009965
BDB009965
BDBM218198
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cc(Cl)ccc3Cl)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H22Cl2F3N5O2
564.395000
BFNVMFCUNLDJMB-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218198; PubChem:CID90318435
Local ready
Direct docking supported
E3L009966
BDB009966
BDBM218199
COc1cc(C#N)cc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C28H25F3N6O3
550.541000
TWQILPBHUMKDOF-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218199; PubChem:CID90324951
Local ready
Direct docking supported
E3L009967
BDB009967
BDBM218201
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1F
C26H23F4N5O2
513.495000
NQUUGRDCMBGMED-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218201; PubChem:CID90325545
Local ready
Direct docking supported
E3L009968
BDB009968
BDBM218203
COc1ccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C(F)(F)F)cc2)cc1Cl
C26H23ClF3N5O3
545.949000
RPAPAIHAPJOZAU-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218203; PubChem:CID90319784
Local ready
Direct docking supported
E3L009969
BDB009969
BDBM218205
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccc(OC(F)F)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H24F5N5O3
561.511000
AKJDKAWCYHAZCG-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218205; PubChem:CID90325544
Local ready
Direct docking supported
E3L009970
BDB009970
BDBM218207
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc(F)cc3F)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H22F5N5O2
531.485000
JVLNYYMRKFGKNZ-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218207; PubChem:CID90325546
Local ready
Direct docking supported
E3L009971
BDB009971
BDBM218209
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc4ncccc4c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C28H23F3N6O2
532.526000
XZHNRPIVKFBZAR-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218209; PubChem:CID90325547
Local ready
Direct docking supported
E3L009972
BDB009972
BDBM218210
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cnc(N(C)C)nc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C25H25F3N8O2
526.523000
GRBXYKRBJHQYGZ-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218210; PubChem:CID90325548
Local ready
Direct docking supported
E3L009973
BDB009973
BDBM218211
COc1cc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C(F)(F)F)cc2)ccn1
C25H23F3N6O3
512.492000
RRSRZHGOILTTEX-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218211; PubChem:CID90318224
Local ready
Direct docking supported
E3L009974
BDB009974
BDBM218213
CCOc1ccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C(F)(F)F)cc2)cn1
C26H25F3N6O3
526.519000
WIROEGWRHDWMRV-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218213; PubChem:CID90325616
Local ready
Direct docking supported
E3L009975
BDB009975
BDBM218215
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccc(F)c3F)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C25H20F5N5O2
517.458000
VWJZCIXRGFKLCM-GFCCVEGCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218215; PubChem:CID90325603
Local ready
Direct docking supported
E3L009976
BDB009976
BDBM218217
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc4c(c3)CCC4)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C28H26F3N5O2
521.543000
PKWTXOHWSKBLIL-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218217; PubChem:CID90325612
Local ready
Direct docking supported
E3L009977
BDB009977
BDBM218219
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc(Br)cc3F)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C25H20BrF4N5O2
578.364000
YZYDVCMEUIPOIN-GFCCVEGCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218219; PubChem:CID90318762
Local ready
Direct docking supported
E3L009978
BDB009978
BDBM218221
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc(Cl)c(Cl)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H22Cl2F3N5O2
564.395000
DEUFQSQHJZQORB-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218221; PubChem:CID90318738
Local ready
Direct docking supported
E3L009979
BDB009979
BDBM218223
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccncc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C25H23F3N6O2
496.493000
WUXNPDHVEQBRHN-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218223; PubChem:CID90325604
Local ready
Direct docking supported
E3L009980
BDB009980
BDBM218274
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccccc3C(N)=O)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C26H23F3N6O3
524.503000
QNTDNOLBFNYJNP-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218274; PubChem:CID90325609
Local ready
Direct docking supported