E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L010001
BDB010001
BDBM218425
Cc1ccc(OCCCO)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(Cl)cc2)c1
C29H32ClN5O4
550.059000
FFIAACRUHUWRNF-GOSISDBHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218425; PubChem:CID118558588
Local ready
Direct docking supported
E3L010002
BDB010002
BDBM218426
CCOc1ccc(C)cc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CC3)c2n1Cc1ccc(Cl)cc1
C27H28ClN5O3
506.006000
HVCKZOLOACTIED-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218426; PubChem:CID90325392
Local ready
Direct docking supported
E3L010003
BDB010003
BDBM218428
COCCOc1ccc(C)cc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CCC3)c2n1Cc1ccc(Cl)cc1
C29H32ClN5O4
550.059000
UUYFPJVZEDIYOE-GOSISDBHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218428; PubChem:CID90325391
Local ready
Direct docking supported
E3L010004
BDB010004
BDBM218494
COCCOc1ccc(C)cc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CC3)c2n1Cc1ccc(Cl)cc1
C28H30ClN5O4
536.032000
NFWIVUIZPWPYMC-QGZVFWFLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218494; PubChem:CID90317801
Local ready
Direct docking supported
E3L010005
BDB010005
BDBM218495
Cc1ccc(OCCO)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1
C27H28ClN5O4
522.005000
IFVSVRPPDNZZAM-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218495; PubChem:CID90325161
Local ready
Direct docking supported
E3L010006
BDB010006
BDBM218496
Cc1ccc(OCCC(=O)O)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1
C28H28ClN5O5
550.015000
PDDKMGULZLSBLE-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218496; PubChem:CID90325614
Local ready
Direct docking supported
E3L010007
BDB010007
BDBM218521
Cc1ccc(OCCC(=O)NCCO)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1
C30H33ClN6O5
593.084000
RLEIOIUDLIVZBC-GOSISDBHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218521; PubChem:CID90325610
Local ready
Direct docking supported
E3L010008
BDB010008
BDBM218522
CNC(=O)CCOc1ccc(C)cc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CC3)c2n1Cc1ccc(Cl)cc1
C29H31ClN6O4
563.058000
MBDUBWZNUGPXSI-QGZVFWFLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218522; PubChem:CID90325591
Local ready
Direct docking supported
E3L010009
BDB010009
BDBM218552
Cc1ccc(OCCCN2CCOCC2)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1
C32H37ClN6O4
605.139000
FMSBOOLGJBBUKI-OAQYLSRUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218552; PubChem:CID90325620
Local ready
Direct docking supported
E3L010010
BDB010010
BDBM218565
COCCN(CCCOc1ccc(C)cc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CC3)c2n1Cc1ccc(Cl)cc1)CCOC
C34H43ClN6O5
651.208000
FJXJRALJUZMHSS-HSZRJFAPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218565; PubChem:CID90317874
Local ready
Direct docking supported
E3L010011
BDB010011
BDBM218572
Cc1ccc(OCCCO)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C#N)cc2)c1
C29H30N6O4
526.597000
VYPCGHIXKZVEFQ-GOSISDBHSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218572; PubChem:CID90325037
Local ready
Direct docking supported
E3L010012
BDB010012
BDBM218576
Cc1ccc(OCCCN2CCN(C)CC2)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1
C33H40ClN7O3
618.182000
GSAKZFZWVCBHRV-JOCHJYFZSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218576; PubChem:CID90325031
Local ready
Direct docking supported
E3L010013
BDB010013
BDBM218577
Cc1ccc(O)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1
C25H24ClN5O3
477.952000
NASPEUGUIIYJAA-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218577; PubChem:CID136632738
Local ready
Direct docking supported
E3L010014
BDB010014
BDBM218578
Cc1ccc(OCC(O)CO)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1
C28H30ClN5O5
552.031000
ZLINCHVBRDXZJS-QRIPLOBPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218578; PubChem:CID90318235
Local ready
Direct docking supported
E3L010015
BDB010015
BDBM218594
Cc1ccc(OCCCO)c(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(Cl)cc2)c1
C28H30ClN5O4
536.032000
FHPSGAHPAGBDCF-QGZVFWFLSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218594; PubChem:CID90318177
Local ready
Direct docking supported
E3L010016
BDB010016
BDBM218595
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2C(C)c2ccc(Cl)cc2)c1
C26H26ClN5O2
475.980000
RFIQWDYELQSAFG-AAFJCEBUSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218595; PubChem:CID90318034
Local ready
Direct docking supported
E3L010017
BDB010017
BDBM218596
Cc1cccc(-c2nc3nc(C(=O)O)nc(NCC4CC4)c3n2C(C)c2ccc(Cl)cc2)c1
C25H24ClN5O2
461.953000
SVPIXLNJNWQONY-UHFFFAOYSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218596; PubChem:CID90318378
Local ready
Direct docking supported
E3L010018
BDB010018
BDBM218604
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@@H](C)C4CC4)c3n2C(C)c2ccc(Cl)cc2)c1
C26H26ClN5O2
475.980000
RFIQWDYELQSAFG-VYRBHSGPSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218604; PubChem:CID90318454
Local ready
Direct docking supported
E3L010019
BDB010019
BDBM218605
Cc1cccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(F)c(C(F)(F)F)c2)c1
C26H23F4N5O2
513.495000
ZIDZYYAWURFFNQ-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218605; PubChem:CID90325051
Local ready
Direct docking supported
E3L010020
BDB010020
BDBM218631
Cc1cccc(-c2nc3nc(C(=O)O)nc4c3n2Cc2cc(C(F)(F)F)ccc2OCC2CC2[C@@H](C)N4)c1
C27H24F3N5O3
523.515000
AUCWQFKTNOLLSY-ZCGYKAAXSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218631; PubChem:CID118566466
Local ready
Direct docking supported