E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L009941
BDB009941
BDBM217401
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccc(OC(F)(F)F)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H23F6N5O3
579.501000
ALPBIIQVJXBXLR-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM217401; PubChem:CID90325602
Local ready
Direct docking supported
E3L009942
BDB009942
BDBM217705
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccc(Cl)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H23ClF3N5O2
529.950000
AEMXGOGKHPPBEX-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM217705; PubChem:CID90317925
Local ready
Direct docking supported
E3L009943
BDB009943
BDBM218079
CNS(=O)(=O)c1ccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)cc1
C27H27F3N6O4S
588.612000
ZEPRPCRZIHKHIM-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218079; PubChem:CID90325608
Local ready
Direct docking supported
E3L009944
BDB009944
BDBM218160
C[C@@H](Nc1nc(C(=O)O)nc2nc(C3CC3)n(Cc3ccc(Cl)cc3)c12)C1CC1
C21H22ClN5O2
411.893000
XKCGIYVXMLRHKC-LLVKDONJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218160; PubChem:CID90318613
Local ready
Direct docking supported
E3L009945
BDB009945
BDBM218162
C[C@@H](Nc1nc(C(=O)O)nc2nc(Cc3ccccc3)n(Cc3ccc(Cl)cc3)c12)C1CC1
C25H24ClN5O2
461.953000
VEIPAQPJILLOFQ-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218162; PubChem:CID90325622
Local ready
Direct docking supported
E3L009946
BDB009946
BDBM218164
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccnc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C24H21F3N6O2
482.466000
RKRWOWGPKFRJMI-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218164; PubChem:CID90318352
Local ready
Direct docking supported
E3L009947
BDB009947
BDBM218166
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccc(C#N)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C27H23F3N6O2
520.515000
IASOJHYJWBXPBG-OAHLLOKOSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218166; PubChem:CID90317947
Local ready
Direct docking supported
E3L009948
BDB009948
BDBM218168
COc1ncc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CCC4)c3n2Cc2ccc(C(F)(F)F)cc2)cc1Cl
C26H24ClF3N6O3
560.964000
MJKCISDZMIVLIU-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218168; PubChem:CID90318696
Local ready
Direct docking supported
E3L009949
BDB009949
BDBM218170
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccccc3F)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CCC1
C26H23F4N5O2
513.495000
BQNNVBZSNMKHAO-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218170; PubChem:CID90320129
Local ready
Direct docking supported
E3L009950
BDB009950
BDBM218172
COc1ccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C(F)(F)F)cc2)cn1
C25H23F3N6O3
512.492000
NVCGYIRUNVBTOK-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218172; PubChem:CID90317875
Local ready
Direct docking supported
E3L009951
BDB009951
BDBM218173
COc1ncc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C(F)(F)F)cc2)cc1F
C25H22F4N6O3
530.482000
QNNJYCJRYBCPKZ-GFCCVEGCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218173; PubChem:CID90324934
Local ready
Direct docking supported
E3L009952
BDB009952
BDBM218175
Cc1cc(C)cc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C(F)(F)F)cc2)c1
C27H26F3N5O2
509.532000
GTOQPQCHQVOWER-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218175; PubChem:CID90324937
Local ready
Direct docking supported
E3L009953
BDB009953
BDBM218177
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cnc(O)c(F)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C24H20F4N6O3
516.455000
ZVSXZGZCKPSWLV-LLVKDONJSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218177; PubChem:CID136632586
Local ready
Direct docking supported
E3L009954
BDB009954
BDBM218181
Cc1ccc(-c2nc3nc(C(=O)O)nc(N[C@H](C)C4CC4)c3n2Cc2ccc(C(F)(F)F)cc2)c(C)c1
C27H26F3N5O2
509.532000
RCFCOTFGDQKXKQ-MRXNPFEDSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218181; PubChem:CID90325013
Local ready
Direct docking supported
E3L009955
BDB009955
BDBM218182
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc(Cl)c(F)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C25H20ClF4N5O2
533.913000
SKONRKCGMNTWQP-GFCCVEGCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218182; PubChem:CID90317605
Local ready
Direct docking supported
E3L009956
BDB009956
BDBM218183
Cc1cc(OC(F)(F)F)ccc1-c1nc2nc(C(=O)O)nc(N[C@H](C)C3CC3)c2n1Cc1ccc(C(F)(F)F)cc1
C27H23F6N5O3
579.501000
WPFSSWCWAJYODW-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218183; PubChem:CID90325020
Local ready
Direct docking supported
E3L009957
BDB009957
BDBM218185
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccccc3Cl)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C25H21ClF3N5O2
515.923000
BOZHRJGOBLIKLC-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218185; PubChem:CID90325017
Local ready
Direct docking supported
E3L009958
BDB009958
BDBM218186
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3cccc(F)c3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C25H21F4N5O2
499.468000
VRJDSVOPJWYNGV-CYBMUJFWSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218186; PubChem:CID90317545
Local ready
Direct docking supported
E3L009959
BDB009959
BDBM218188
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc(C#N)cc3)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C26H21F3N6O2
506.488000
GUXVFSWBHXITDQ-CQSZACIVSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218188; PubChem:CID90325018
Local ready
Direct docking supported
E3L009960
BDB009960
BDBM218190
C[C@@H](Nc1nc(C(=O)O)nc2nc(-c3ccc(Cl)cc3Cl)n(Cc3ccc(C(F)(F)F)cc3)c12)C1CC1
C25H20Cl2F3N5O2
550.368000
YXGLEOQIMHVVQB-GFCCVEGCSA-N Q00987 E3 ubiquitin-protein ligase Mdm2
BindingDB, PubChem
BindingDB:BDBM218190; PubChem:CID90324952
Local ready
Direct docking supported