E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L041161
BDB041161
US20250289799, Example 122
COc1cc(CNc2nc(-c3c(OC)ncnc3C3CC3)nc3ccoc23)ccc1-n1nc(C(F)(F)F)cc1C
C27H24F3N7O3
551.529000
QWTOQZGMGGGZFB-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771962; PubChem:CID176244211
Local ready
Direct docking supported
E3L041162
BDB041162
US20250289799, Example 123
COc1ncnc(C2CC2)c1-c1nc(NCc2ccc(-c3nc(C(F)F)cn3C)cc2)c2occc2n1
C26H23F2N7O2
503.513000
IRVYRMKTHVFEON-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771963; PubChem:CID176244175
Local ready
Direct docking supported
E3L041163
BDB041163
US20250289799, Example 124
COc1ncnc(C2CC2)c1-c1ncc(Cl)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C24H21ClF3N7O
515.927000
BWMYLQMWJXQQFQ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771964; PubChem:CID176244296
Local ready
Direct docking supported
E3L041164
BDB041164
US20250289799, Example 125
COc1ncnc(C2CC2)c1-c1ncc(Cl)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C3CC3)cc2)n1
C26H23ClF3N7O
541.965000
IKJHVHWHEHMGQM-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771965; PubChem:CID176244217
Local ready
Direct docking supported
E3L041165
BDB041165
US20250289799, Example 126
COc1ncnc(C2CC2)c1-c1ncc(Cl)c(NCc2ccc(-c3nc(C(F)(F)F)cn3CF)cc2)n1
C24H20ClF4N7O
533.917000
PXGWTYOBZBPUTA-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771966; PubChem:CID176244260
Local ready
Direct docking supported
E3L041166
BDB041166
US20250289799, Example 127
COc1ncnc(C2CC2)c1-c1ncc(F)c(N(C)Cc2ccc(-c3nc(C(F)(F)F)cn3C(C)C)cc2)n1
C27H27F4N7O
541.553000
NWZBULYWZXMKKP-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771967; PubChem:CID176244190
Local ready
Direct docking supported
E3L041167
BDB041167
US20250289799, Example 128
[2H]C([2H])([2H])N(Cc1ccc(-c2nc(C(F)(F)F)cn2C2CC2)cc1)c1nc(-c2c(OC)ncnc2C2CC2)ncc1F
C27H25F4N7O
542.555305
JHSYQHLNUBHKGO-FIBGUPNXSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771968; PubChem:CID176244181
Local ready
Direct docking supported
E3L041168
BDB041168
US20250289799, Example 129
[2H]C([2H])([2H])N(Cc1ccc(-c2nc(C(F)(F)F)cn2C(C)C)cc1)c1nc(-c2c(OC)ncnc2C2CC2)ncc1F
C27H27F4N7O
544.571305
NWZBULYWZXMKKP-HPRDVNIFSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771969; PubChem:CID176244186
Local ready
Direct docking supported
E3L041169
BDB041169
US20250289799, Example 130
[2H]C([2H])([2H])N(Cc1ccc(-c2nc(C(F)(F)F)cn2CF)cc1)c1nc(-c2c(OC)ncnc2C2CC2)ncc1F
C25H22F5N7O
534.507305
AZRNVXAZPIAHOO-FIBGUPNXSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771970; PubChem:CID176244193
Local ready
Direct docking supported
E3L041170
BDB041170
US20250289799, Example 131
COc1ncnc(C2CC2)c1-c1ncc(C#N)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C25H21F3N8O
506.492000
JMEDKCLMXAJDMF-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771971; PubChem:CID165400951
Local ready
Direct docking supported
E3L041171
BDB041171
US20250289799, Example 132
C#Cc1cnc(-c2c(OC)ncnc2C2CC2)nc1NCc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C26H22F3N7O
505.504000
SIECUWPKUMGQKK-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771972; PubChem:CID176244123
Local ready
Direct docking supported
E3L041172
BDB041172
US20250289799, Example 133
COc1ncnc(C2CC2)c1-c1ncc(OC(F)F)c(NCC2CCN(c3nc(C(F)(F)F)cn3C)CC2)n1
C24H27F5N8O2
554.524000
ULNPAWMBAVXQEI-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771973; PubChem:CID176244298
Local ready
Direct docking supported
E3L041173
BDB041173
US20250289799, Example 134
COc1ncnc(C2CC2)c1-c1ncc(OC(F)F)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)n1
C25H22F5N7O2
547.488000
FDJNPANWBIDYFE-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771974; PubChem:CID176244110
Local ready
Direct docking supported
E3L041174
BDB041174
US20250289799, Example 135
COc1ncnc(C2CC2)c1-c1ncc(OC(F)F)c(NCc2ccc(-n3nc(C(F)(F)F)cc3C)cc2)n1
C25H22F5N7O2
547.488000
PNCHVEHBGGOBQM-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771975; PubChem:CID176244157
Local ready
Direct docking supported
E3L041175
BDB041175
US20250289799, Example 136
COc1cc(-c2nc(C(F)(F)F)cn2C)ccc1CNc1nc(-c2c(OC)ncnc2C2CC2)ncc1OC(F)F
C26H24F5N7O3
577.514000
XROZNNHDQFNGSQ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771976; PubChem:CID176244314
Local ready
Direct docking supported
E3L041176
BDB041176
US20250289799, Example 137
COc1ncnc(C2CC2)c1-c1ncc(CO)c(NCc2ccc(-c3nc(C(F)(F)F)cn3C(C)C)cc2)n1
C27H28F3N7O2
539.562000
DCKKLJKTUKGBKK-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771977; PubChem:CID170707707
Local ready
Direct docking supported
E3L041177
BDB041177
US20250289799, Example 138
COCc1cnc(-c2c(OC)ncnc2C2CC2)nc1N(C)Cc1ccc(-c2nc(C(F)(F)F)cn2C(C)C)cc1
C29H32F3N7O2
567.616000
XOKIRIXERRFQJF-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771978; PubChem:CID176244204
Local ready
Direct docking supported
E3L041178
BDB041178
US20250289799, Example 139
C#CCN(Cc1ccc(-c2nc(C(F)(F)F)cn2C)cc1)c1nc(-c2c(OC)ncnc2C2CC2)ncc1OC
C28H26F3N7O2
549.557000
PBUPMKGKBDYPIJ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771979; PubChem:CID176244134
Local ready
Direct docking supported
E3L041179
BDB041179
US20250289799, Example 140
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1N(Cc1ccc(-c2nc(C(F)(F)F)cn2C)cc1)C1CCOC1
C29H30F3N7O3
581.599000
LNHRYZHXNDHHSY-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771980; PubChem:CID176244185
Local ready
Direct docking supported
E3L041180
BDB041180
US20250289799, Example 141
COc1cnc(-c2c(OC)ncnc2C2CC2)nc1N(Cc1ccc(-c2nc(C(F)(F)F)cn2C)cc1)C1CC1
C28H28F3N7O2
551.573000
WOUITGFYYPCTCH-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM771981; PubChem:CID176244238
Local ready
Direct docking supported