E3 Ligase Ligand Database

MGD and E3 ligand related compounds for browsing and docking.
67228 compounds match the current filters. 123739 source records are linked to them.
Compound ID Name Formula / MW InChIKey E3 Target Source Docking structure
E3L041201
BDB041201
US20250289799, Example 162
COc1cnc(-c2c(Cl)cnn2C(C)C)nc1NCc1ccc(-c2ccccn2)cc1
C23H23ClN6O
434.931000
FEKOIYXJHVOYIJ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772002; PubChem:CID176244137
Local ready
Direct docking supported
E3L041202
BDB041202
US20250289799, Example 163
COc1cnc(-c2c(Cl)cnn2C(C)C)nc1NCC1CCN(c2nc(C(F)(F)F)cn2C)CC1
C22H28ClF3N8O
512.968000
LBMZBFNZSIYGTM-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772003; PubChem:CID176244141
Local ready
Direct docking supported
E3L041203
BDB041203
US20250289799, Example 164
COc1cnc(-c2c(Cl)cnn2C(C)C)nc1NCc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C23H23ClF3N7O
505.932000
VTJJLXUHGABRCL-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772004; PubChem:CID176244242
Local ready
Direct docking supported
E3L041204
BDB041204
US20250289799, Example 165
COc1cnc(-c2c(Cl)cnn2C(C)C)nc1NCc1ccc(-n2nc(C(F)(F)F)cc2C)cc1
C23H23ClF3N7O
505.932000
ZXFXEWZESNJFHX-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772005; PubChem:CID176244102
Local ready
Direct docking supported
E3L041205
BDB041205
US20250289799, Example 166
CC(C)n1ncc(Cl)c1-c1nc(NCc2ccc(-c3ccccn3)cc2)c2occc2n1
C24H21ClN6O
444.926000
RKHYTOSBSABWAI-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772006; PubChem:CID176244218
Local ready
Direct docking supported
E3L041206
BDB041206
US20250289799, Example 167
CC(C)n1ncc(Cl)c1-c1nc(NCc2ccc(-c3nc(C(F)(F)F)cn3C)cc2)c2occc2n1
C24H21ClF3N7O
515.927000
LSWVZMVHULIPJJ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772007; PubChem:CID176244231
Local ready
Direct docking supported
E3L041207
BDB041207
US20250289799, Example 168
Cc1cc(C(F)(F)F)nn1-c1ccc(CNc2nc(-c3c(Cl)cnn3C(C)C)nc3ccoc23)cc1
C24H21ClF3N7O
515.927000
FXJQKAMCKAKBRM-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772008; PubChem:CID176244201
Local ready
Direct docking supported
E3L041208
BDB041208
US20250289799, Example 169
COc1cnc(-c2ccccc2C2CC2)nc1NCc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C26H24F3N5O
479.506000
MTNAHCMPPPIFRC-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772009; PubChem:CID176244127
Local ready
Direct docking supported
E3L041209
BDB041209
US20250289799, Example 170
COc1cnc(-c2ccccc2C2CC2)nc1NCc1ccc(-n2nc(C(F)(F)F)cc2C)cc1
C26H24F3N5O
479.506000
ZJWUIRUOCIUDHP-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772010; PubChem:CID176244206
Local ready
Direct docking supported
E3L041210
BDB041210
US20250289799, Example 171
COc1cc(-c2nc(C(F)(F)F)cn2C)ccc1CNc1nc(-c2ccccc2C2CC2)ncc1OC
C27H26F3N5O2
509.532000
VOCRYBKFHUNSRZ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772011; PubChem:CID176244099
Local ready
Direct docking supported
E3L041211
BDB041211
US20250289799, Example 172
COc1cc(CNc2nc(-c3ccccc3C3CC3)ncc2OC)ccc1-c1nc(C(F)(F)F)cn1C
C27H26F3N5O2
509.532000
PKKLYVQGWYEFEU-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772012; PubChem:CID176244249
Local ready
Direct docking supported
E3L041212
BDB041212
US20250289799, Example 173
Cn1cc(C(F)(F)F)nc1-c1ccc(CNc2nc(-c3ccccc3C3CC3)nc3ccoc23)cc1
C27H22F3N5O
489.501000
ZQQHWDAESUUUBG-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772013; PubChem:CID176244105
Local ready
Direct docking supported
E3L041213
BDB041213
US20250289799, Example 174
Cc1cc(C(F)(F)F)nn1-c1ccc(CNc2nc(-c3ccccc3C3CC3)nc3ccoc23)cc1
C27H22F3N5O
489.501000
OATPWTPUURDMDS-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772014; PubChem:CID176244109
Local ready
Direct docking supported
E3L041214
BDB041214
US20250289799, Example 175
COc1cc(-c2nc(C(F)(F)F)cn2C)ccc1CNc1nc(-c2ccccc2C2CC2)nc2ccoc12
C28H24F3N5O2
519.527000
XPNPGOQQUGFDRR-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772015; PubChem:CID176244142
Local ready
Direct docking supported
E3L041215
BDB041215
US20250289799, Example 176
COc1cc(CNc2nc(-c3ccccc3C3CC3)nc3ccoc23)ccc1-c1nc(C(F)(F)F)cn1C
C28H24F3N5O2
519.527000
OCKSPIGTROLROW-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772016; PubChem:CID176244098
Local ready
Direct docking supported
E3L041216
BDB041216
US20250289799, Example 177
COc1cnc(-c2c(OC)cnn2C(C)C)nc1N(C)CC1CCN(c2ccccn2)CC1
C24H33N7O2
451.575000
YFZDWXCDZMWQSO-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772017; PubChem:CID176244267
Local ready
Direct docking supported
E3L041217
BDB041217
US20250289799, Example 178
COc1cnc(-c2c(OC)cnn2C(C)C)nc1NCc1ccc(-c2ccccn2)cc1
C24H26N6O2
430.512000
FSUGLILHBBHYAV-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772018; PubChem:CID176244104
Local ready
Direct docking supported
E3L041218
BDB041218
US20250289799, Example 179
COc1cnc(-c2c(OC)cnn2C(C)C)nc1NCC1CCN(c2nc(C(F)(F)F)cn2C)CC1
C23H31F3N8O2
508.549000
USEJPPVVCFWZCZ-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772019; PubChem:CID176244156
Local ready
Direct docking supported
E3L041219
BDB041219
US20250289799, Example 180
COc1cnc(-c2c(OC)cnn2C(C)C)nc1NCc1ccc(-c2nc(C(F)(F)F)cn2C)cc1
C24H26F3N7O2
501.513000
MMGWTGWOEGIBKG-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772020; PubChem:CID176244235
Local ready
Direct docking supported
E3L041220
BDB041220
US20250289799, Example 181
COc1cnn(C(C)C)c1-c1nc(NCc2ccc(-c3ccccn3)cc2)c2occc2n1
C25H24N6O2
440.507000
AVACTWYCWOQDLT-UHFFFAOYSA-N Q8TAF3 Ubiquitin carboxyl-terminal hydrolase 1
BindingDB, PubChem
BindingDB:BDBM772021; PubChem:CID176244299
Local ready
Direct docking supported